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jacpop (version 0.6)

Jaccard Index for Population Structure Identification

Description

Uses the Jaccard similarity index to account for population structure in sequencing studies. This method was specifically designed to detect population stratification based on rare variants, hence it will be especially useful in rare variant analysis.

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Version

Install

install.packages('jacpop')

Monthly Downloads

167

Version

0.6

License

GPL-3

Maintainer

Dmitry Prokopenko

Last Published

June 3rd, 2019

Functions in jacpop (0.6)

generate_pw_jaccard

Calculate pairwise Jaccard similarity matrix