jags_df

Extracts the posterior samples from <code>jagsUI</code> output in the form of
a <code>data.frame</code>. This simpler construction has a few benefits: operations may
be more straightforward, and posterior objects will be smaller files and can be
written to an external table or .csv, etc.

Tools are provided to streamline Bayesian analyses in 'JAGS' using
the 'jagsUI' package. Included are functions for extracting output in
simpler format, functions for streamlining assessment of convergence, and
functions for producing summary plots of output. Also included is a
function that provides a simple template for running 'JAGS' from 'R'.
Referenced materials can be found at <DOI:10.1214/ss/1177011136>.

Matt Tyers

jagshelper

Extracting and Visualizing Output from 'jagsUI'

jags_df function

<dl><dt>x</dt>
<dd>Output object from <code>jagsUI::jags()</code></dd>
<dt>p</dt>
<dd>Optional string to begin posterior names. If <code>NULL</code> is used, all parameters will be returned.</dd>
<dt>exact</dt>
<dd>Whether name must be an exact match (<code>TRUE</code>) or with initial sub-string matching only supplied characters (<code>FALSE</code>).
Defaults to <code>FALSE.</code></dd></dl>

Arguments

Author

Extract data.frame — jags_df

<dl>

<dt>x</dt>
<dd>Output object from <code>jagsUI::jags()</code></dd>


<dt>p</dt>
<dd>Optional string to begin posterior names. If <code>NULL</code> is used, all parameters will be returned.</dd>


<dt>exact</dt>
<dd>Whether name must be an exact match (<code>TRUE</code>) or with initial sub-string matching only supplied characters (<code>FALSE</code>).
Defaults to <code>FALSE.</code></dd>

</dl>

jags_df: Extract data.frame

Description

Usage

Value

Arguments

Author

See Also

Examples