trace_df

Trace plot of each column of a posterior 'data.frame'.

Tools are provided to streamline Bayesian analyses in 'JAGS' using
the 'jagsUI' package. Included are functions for extracting output in
simpler format, functions for streamlining assessment of convergence, and
functions for producing summary plots of output. Also included is a
function that provides a simple template for running 'JAGS' from 'R'.
Referenced materials can be found at <DOI:10.1214/ss/1177011136>.

Matt Tyers

jagshelper

Extracting and Visualizing Output from 'jagsUI'

trace_df function

<dl><dt>df</dt>
<dd>Posterior data.frame</dd>
<dt>nline</dt>
<dd>Number of chains</dd>
<dt>parmfrow</dt>
<dd>Optional call to <code>par(mfrow)</code> for the number of rows &amp; columns of plot window. Returns the graphics device to previous state afterward.</dd>
<dt>...</dt>
<dd>additional plotting arguments or arguments to <code>trace_line()</code></dd></dl>

Arguments

Author

Trace plot of each column of a data.frame. — trace_df

<dl>

<dt>df</dt>
<dd>Posterior data.frame</dd>


<dt>nline</dt>
<dd>Number of chains</dd>


<dt>parmfrow</dt>
<dd>Optional call to <code>par(mfrow)</code> for the number of rows &amp; columns of plot window. Returns the graphics device to previous state afterward.</dd>


<dt>...</dt>
<dd>additional plotting arguments or arguments to <code>trace_line()</code></dd>

</dl>

trace_df: Trace plot of each column of a `data.frame`.

Description

Usage

Value

Arguments

Author

See Also

Examples