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jarbes (version 2.3.0)

Just a Rather Bayesian Evidence Synthesis

Description

Provides a new class of Bayesian meta-analysis models that incorporates a model for internal and external validity bias. In this way, it is possible to combine studies of diverse quality and different types. For example, we can combine the results of randomized control trials (RCTs) with the results of observational studies (OS).

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Version

Install

install.packages('jarbes')

Monthly Downloads

266

Version

2.3.0

License

GPL (>= 2)

Maintainer

Pablo Emilio Verde

Last Published

June 27th, 2025

Functions in jarbes (2.3.0)

diabetes_eyes

Individual Participant Data: Diabetic Eyes Data
diagnostic.metarisk

Diagnostic function for metarisk object in jarbes
diagnostic.bmeta

Diagnostic function for bmeta object in jarbes
effect

Generic effect function.
healingipd

Individual participant data for diabetic patients
hips

Meta-analysis: generalized evidence synthesis of total hip replacement
plot.bcmeta

Generic plot function for bcmeta object in jarbes.
plot.bmeta

Generic plot function for bmeta object in jarbes.
print.simData

Generic print function for simData object.
dpmmeta

Bayesian Meta-Analysis with Dirichlet Process Mixtures Priors
metarisk

Bayesian meta-analysis for using baseline risk adjustment
ppvcap

Efficacy of Pneumococcal Polysaccharide Vaccine in Preventing Community Acquired Pneumonia
plot.simData

Forest Plot for simData Objects
dpmetareg

Bayesian Meta-Analysis with Dirichlet Process Priors
print.dpmmeta

Generic print function for dpmmeta object in jarbes.
macula_rwe

Meta-analysis: 83 observational studies assessing the effectiveness of intravitreal therapy for diabetic maculaedema
simData

Simulate Data for Meta-Analysis
summary.metarisk

Generic summary function for metarisk object in jarbes
summary.simData

Summary method for simData objects
summary.dpmeta

Generic summary function for dpmmeta object in jarbes
bcdpmeta

Bias Corrected Meta-Analysis with Dirichlet Process Priors
bcmixmeta

Bias Corrected Meta-Analysis with Dirichlet Mixture Process Priors for the biased component
colon_cancer

Meta-analysis: Real World Evidence in metastatic colorectal cancer, comparing antiangiogenic treatments with chemotherapy
bcmeta

Bias-Corrected Meta-Analysis for Combining Studies of Different Types and Quality
b3lmeta

Bayesian Meta-Analysis for Combining Studies
caterplot_compare

Compare Posterior Estimates from Bayesian Models
bmeta

Bayesian Meta-Analysis for Combining Studies
bchmr

Bias-Corrected Bayesian Nonparametric Model to combine aggregated and individual participant data for cross design synthesis.
covid19

Meta-analysis: Observational studies assessing the impact of risk factors on the severity and mortality of COVID-19 cases
acupuncture

Meta-analysis: 29 randomized controlled studies (RCT) assessing the efficacy of acupuncture treatments as complementary treatment in depression patients
dpmeta

Bayesian Meta-Analysis with Dirichlet Process Priors
diagnostic.hmr

Diagnostic function for hmr object in jarbes
diagnostic.bcmixmeta

Diagnostic function for bcmixmeta object in jarbes
diagnostic.bcdpmeta

Diagnostic function for bcdpmeta object in jarbes
diagnostic

Generic diagnostic function.
diagnostic.bcmeta

Diagnostic function for bcmeta object in jarbes
diagnostic.b3lmeta

Diagnostic function for b3lmeta object in jarbes
hmr

Bayesian meta-analysis to combine aggregated and individual participant data for cross design synthesis.
effect.hmr

Posterior distribution of Effectiveness for a subgroup of patients
fnrpcr

Meta-Analysis: Variation in False-Negative Rate of Reverse Transcriptase Polymerase Chain Reaction–Based SARS-CoV-2 Tests by Time Since Exposure
longcovid

Meta-analysis: Long-COVID Health Outcomes
healing

Efficacy of diabetic foot healing using adjuvant treatments
plot.hmr

Generic plot function for hmr object in jarbes.
plot.b3lmeta

Generic plot function for b3lmeta object in jarbes.
print.bcmixmeta

Generic print function for bcmixmeta object in jarbes.
plot.dpmmeta

Generic plot function for dpmeta object in jarbes.
print.bcmeta

Generic print function for bcmeta object in jarbes.
plot.dpmeta

Generic plot function for bmeta object in jarbes.
summary.bcmeta

Generic summary function for bcmeta object in jarbes
summary.bcdpmeta

Generic summary function for bcdpmeta object in jarbes
plot.metarisk

Generic plot function for metarisk object in jarbes.
print.dpmetareg

Generic print function for dpmeta object in jarbes.
trisomy21

Meta-analysis: Observational studies assessing the relationship of a positive ICPC (Isolated Choroid Plexus Cyst) on Trisomy 21
print.bchmr

Generic print function for hmr object in jarbes.
print.bcdpmeta

Generic print function for bcdpmeta object in jarbes.
stemcells

Meta-analysis: 31 randomized controled trials (RCTs) with reported discrepancies
plot.bcdpmeta

Generic plot function for bcdpmeta object in jarbes.
summary.hmr

Generic summary function for hmr object in jarbes
summary.dpmmeta

Generic summary function for dpmmeta object in jarbes
print.bmeta

Generic print function for bcmeta object in jarbes.
print.dpmeta

Generic print function for dpmeta object in jarbes.
summary.b3lmeta

Generic summary function for bmeta object in jarbes
ppvipd

Efficacy of Pneumococcal Polysaccharide Vaccine in Preventing Invasive Pneumococcal Disease
print.b3lmeta

Generic print function for b3lmeta object in jarbes.
print.hmr

Generic print function for hmr object in jarbes.
print.metarisk

Generic print function for metarisk object in jarbes.
summary.bmeta

Generic summary function for bmeta object in jarbes