plot.bcmeta: Generic plot function for bcmeta object.

Description

This function is built with `ggplot2`. Parameters such as `binwidth`, `adjust`, `density.color`, `density.lwd`, `density.lty`, and `density.alpha` correspond directly to arguments in the `ggplot2` geoms.

Usage

# S3 method for bcmeta
plot(
  x,
  plot.type = "predictive_with_bias",
  n.samples = NULL,
  x.lim = NULL,
  y.lim = NULL,
  x.lab = expression(theta^{
     new
 }),
  y.lab = "Posterior Predictive Distribution",
  title.plot = "Bias-Corrected Meta-Analysis",
  show.histogram = TRUE,
  show.rug = TRUE,
  show.legend.lines = FALSE,
  binwidth = 0.08,
  adjust = 1,
  density.color = "blue",
  density.lty = "solid",
  density.lwd = 1,
  density.alpha = 0.2,
  hist.color = "black",
  hist.fill = "grey95",
  rug.color = "green",
  rug.alpha = 0.5,
  predictive.color = "blue",
  mu.color = "black",
  bias.color = "red",
  ...
)

Arguments

x: The object generated by the bcmeta function.
plot.type: A character string specifying the type of plot: "predictive_with_bias" (default), "predictive", "tau_posterior".
n.samples: The number of posterior samples to plot.
x.lim: Numeric vector of length 2 specifying the x-axis limits.
y.lim: Numeric vector of length 2 specifying the y-axis limits.
x.lab: Text with the label of the x-axis. Defaults to \(\theta^{new}\).
y.lab: Text with the label of the y-axis. Defaults to "Posterior Predictive Distribution".
title.plot: Text for setting a title in the plot. Defaults to "Bias-Corrected Meta-Analysis".
show.histogram: A logical value indicating whether to show the histogram.
show.rug: A logical value indicating whether to show the rug plot.
show.legend.lines: A logical value indicating whether to show the legend for the density curves in the "predictive_with_bias" plot.
binwidth: A numeric value specifying the bin width for the histogram.
adjust: A numeric value to adjust the bandwidth of the density curves.
density.color: A character value for the density curve color (used for non-comparison plots).
density.lty: A character value for the density curve line type.
density.lwd: A numeric value for the density curve line width.
density.alpha: A numeric value between 0 and 1 for the density curve transparency.
hist.color: A character value for the histogram border color.
hist.fill: A character value for the histogram fill color.
rug.color: A character value for the rug plot color.
rug.alpha: A numeric value between 0 and 1 for the rug plot transparency.
predictive.color: A character value specifying the color of the posterior predictive density curve in "predictive_with_bias".
mu.color: A character value specifying the color of the posterior mean density curve in "predictive_with_bias".
bias.color: A character value specifying the color of the bias-inflated mean density curve in "predictive_with_bias".
...: ...