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jsmodule

RStudio Addins and Shiny Modules for Medical Research

Install

install.packages("jsmodule")
library(jsmodule)

## From github: latest version
remotes::install_github('jinseob2kim/jsmodule')

RStudio Addins

Basic statistics

Use jsBasicGadget(data) or Click Basic statistics Addin with the dragged name of data.

jsBasicGadget(mtcars)

Basic statistics with external data

Use jsBasicExtAddin() or Click Basic statistics with external data Addin without any drag

jsBasicExtAddin()

Repeated measure analysis

Use jsRepeatedGadget(data) or Click Repeated measure analysis Addin with the dragged name of data.

jsRepeatedGadget(mtcars)

Repeated measure analysis with external data

Use jsRepeatedExtAddin() or Click Repeated measure analysis with external data Addin without any drag

jsRepeatedExtAddin()

Survey data analysis

Use jsSurveyGadget(data) or Click Survey data analysis Addin with the dragged name of data.

library(survey)
data(api)
jsSurveyGadget(apistrat)

Survey data analysis with external data

Use jsSurveyExtAddin() or Click Survey data analysis with external data Addin without any drag

jsSurveyExtAddin()

Propensity score analysis

Use jsPropensityGadget(data) or Click Propensity score analysis Addin with the dragged name of data.

jsPropensityGadget(mtcars)

Propensity score analysis with external data

Use jsPropensityExtAddin() or Click Propensity score analysis with external data Addin without any drag

jsPropensityExtAddin()

Web applications

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Version

Install

install.packages('jsmodule')

Monthly Downloads

1,044

Version

1.5.7

License

Apache License 2.0

Issues

Pull Requests

Stars

Forks

Maintainer

Jinseob Kim

Last Published

August 20th, 2024

Functions in jsmodule (1.5.7)

forestglmServer

forestglmServer:shiny module server for forestglm
ggplotdownUI

ggplotdownUI: Option & download module UI for ggplot
jsBasicGadget

jsBasicGadget: Shiny Gadget of Basic Statistics in Medical Research.
ggpairsModuleUI1

ggpairsModuleUI1: Variable selection module UI for ggpairs
barUI

barUI: shiny module UI for barplot
ggpairsModuleUI2

ggpairsModuleUI2: Option & download module UI for ggpairs
jsBasicExtAddin

jsBasicExtAddin: RStudio Addin for basic data analysis with external data.
jsRepeatedAddin

jsRepeatedAddin: Rstudio addin of jsRepeatedGadget
jsPropensityGadget

jsPropensityGadget: Shiny Gadget for propensity score analysis.
histogramServer

histogramServer: shiny module server for histogram.
ggpairsModule

ggpairsModule: shiny module server for basic/scatter plot.
jsSurveyExtAddin

jsSurveyExtAddin: RStudio Addin for survey data analysis with external data.
jsSurveyAddin

jsSurveyAddin: Rstudio addin of jsSurveyGadget
ggpairsModule2

ggpairsModule2: shiny module server for basic/scatter plot for reactive data.
jsSurveyGadget

jsSurveyGadget: Shiny Gadget of survey data analysis.
kaplanModule

kaplanModule: shiny module server for kaplan-meier plot.
mklist

mklist: function to make variable list lncluding specific variables.
forestglmUI

forestglmUI:Shiny module UI for forestglm
mksetdiff

mksetdiff: function to make variable list excluding specific variables.
histogramUI

histogramUI: shiny module UI for histogram
rocModule

rocModule: shiny module server for roc analysis
regressModuleUI

regressModuleUI: shiny modulde UI for linear regression.
lineUI

lineUI: shiny module UI for lineplot
regressModule2

regressModule2: Shiny modulde server for linear regression for reactive data.
regress.display2

regress.display2: modified epiDisplay's regress.display function
logistic.display2

logistic.display2: Modified epiDisplay's logistic.display function.
reclassificationJS

reclassificationJS: Function for reclassification table and statistics
optionUI

optionUI: Option UI with icon
tb1module

tb1module: table 1 shiny module server.
survIDINRI_helper

survIDINRI_helper: Helper function for IDI.INF.OUT in survIDINRI packages
tb1simple

tb1simple: tb1 module server for propensity score analysis
jsPropensityAddin

jsPropensityAddin: Rstudio addin of jsPropensityGadget
mk.lev2

mk.lev2: level generating function
timeROC_table

timeROC_table: extract AUC information from list of timeROChelper object.
tb1simpleUI

tb1simpleUI : tb1 module UI for propensity score analysis
jsPropensityExtAddin

jsPropensityExtAddin: RStudio Addin for propensity score analysis with external data.
logisticModule2

logisticModule2: Shiny modulde server for logistic regression for reactive data.
jsRepeatedExtAddin

jsRepeatedExtAddin: RStudio Addin for repeated measure analysis with external data.
timerocModule

timerocModule: shiny module server for time-dependent roc analysis
timeROChelper

timeROChelper: Helper function for timerocModule
jsBasicAddin

jsBasicAddin: Rstudio addin of jsBasicGadget
jsRepeatedGadget

jsRepeatedGadget: Shiny Gadget of Repeated measure analysis.
kaplanUI

kaplanUI: shiny module UI for kaplan-meier plot
scatterServer

scatterServer: shiny module server for scatterplot.
tb1moduleUI

tb1moduleUI: table 1 module UI.
lineServer

lineServer: shiny module server for lineplot.
scatterUI

scatterUI: shiny module UI for scatterplot
tb1module2

tb1module2: table 1 shiny module server for reactive data.
rocModule2

rocModule2: shiny module server for roc analysis- input number of model as integer
tb1simple2

tb1simple2: tb1 module for propensity score analysis for reactive data
timerocUI

timerocUI: shiny module UI for time-dependent roc analysis
rocUI

rocUI: shiny module UI for roc analysis
FileRepeatedInput

FileRepeatedInput: File upload UI for repeated measure analysis.
FileRepeated

FileRepeated: File upload server module for repeated measure analysis.
GEEModuleLogistic

GEEModuleLogistic: shiny modulde server for binomial gaussian generalized estimating equation(GEE) using reactive data.
ROC_table

ROC_table: extract AUC, NRI and IDI information from list of roc object in pROC packages.
FileSurveyInput

FileSurveyInput: File upload UI for survey data analysis.
GEEModuleLinear

GEEModuleLinear: shiny modulde server for gaussian generalized estimating equation(GEE) using reactive data.
GEEModuleUI

GEEModuleUI: shiny modulde UI for generalized estimating equation(GEE).
FileSurvey

FileSurvey: File upload server module for survey data analysis.
FilePsInput

FilePsInput: Shiny module UI for file upload for propensity score matching.
FilePs

FilePs: Shiny module Server for file upload for propensity score matching.
barServer

barServer: shiny module server for barplot.
forestcoxUI

forestcoxUI:shiny module UI for forestcox
coxModule

coxModule: shiny modulde server for Cox's model.
boxServer

boxServer: shiny module server for boxplot.
coxUI

coxUI: shiny modulde UI for Cox's model.
boxUI

boxUI: shiny module UI for boxplot
forestcoxServer

forestcoxServer:shiny module server for forestcox
csvFile

csvFile: Shiny module Server for file upload.
csvFileInput

csvFileInput: Shiny module UI for file upload.