Individual based simulation of the accumulation of junctions for a chromosome with regularly distributed markers.
sim_fin_chrom(
pop_size = 100,
freq_ancestor_1 = 0.5,
total_runtime = 100,
morgan = 1,
seed = 42,
R = 100
)vector of the average number of junctions at time = [0, total_runtime]
Population Size
Frequency of ancestor 1 at t = 0
Maximum time after which the simulation is to be stopped
Mean number of crossovers per meiosis (e.g. size in Morgan of the chromosome)
Seed of the pseudo-random number generator
Number of regularly distributed markers
cat("example sim_fin_chrom")
sim_fin_chrom(pop_size = 100, freq_ancestor_1 = 0.5,
total_runtime = 10, morgan = 1, seed = 42,
R = 100)
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