geno

A matrix containing example genotypes for 4056 SNPs of 50 individuals. 
Column names give the rs-numbers of 4056 example SNPs, row names the 
identifiers of 50 example individuals.

datasets

Methods to extract information on pathways, genes and SNPs from
online databases. It provides functions for data preparation and evaluation
of genetic influence on a binary outcome using the logistic kernel machine
test (LKMT). Three different kernel functions are offered to analyze genotype
information in this variance component test: A linear kernel, a size-adjusted
kernel and a network based kernel.

Juliane Manitz

kangar00

Kernel Approaches for Nonlinear Genetic Association Regression

geno function

A <code>matrix</code> with 5 rows and 4056 columns:<dl class="dl-horizontal">
 each entry in the matrix represents a simulated minor allele count for the
corresponding SNP and individual.
</dl>

Format

Example genotypes for 50 individuals. — geno

A <code>matrix</code> with 5 rows and 4056 columns:<dl class='dl-horizontal'>
 each entry in the matrix represents a simulated minor allele count for the
corresponding SNP and individual.
</dl>

geno: Example genotypes for 50 individuals.

Description

Usage

Arguments

Format