pheno

A dataset containing simulated example phenotypes for 50 individuals 
row names include the identifiers of 50 example individuals.

datasets

Methods to extract information on pathways, genes and SNPs from
online databases. It provides functions for data preparation and evaluation
of genetic influence on a binary outcome using the logistic kernel machine
test (LKMT). Three different kernel functions are offered to analyze genotype
information in this variance component test: A linear kernel, a size-adjusted
kernel and a network based kernel.

Juliane Manitz

kangar00

Kernel Approaches for Nonlinear Genetic Association Regression

pheno function

A <code>data frame</code> with 50 rows and 3 variables:<dl class="dl-horizontal">
 <dt>pheno</dt><dd>includes the case-control status for each individual, coded as
 1(case) or 0 (control)</dd>
 <dt>sex</dt><dd>includes gender information for the 50 individuals, coded as 1 
 (male) or 0 (female)</dd>
 <dt>age</dt><dd>numerical value giving the persons age</dd>
</dl>

Format

Example phenotype file for 50 individuals. — pheno

A <code>data frame</code> with 50 rows and 3 variables:<dl class='dl-horizontal'>
 <dt>pheno</dt><dd>includes the case-control status for each individual, coded as
 1(case) or 0 (control)</dd>
 <dt>sex</dt><dd>includes gender information for the 50 individuals, coded as 1 
 (male) or 0 (female)</dd>
 <dt>age</dt><dd>numerical value giving the persons age</dd>
</dl>

pheno: Example phenotype file for 50 individuals.

Description

Usage

Arguments

Format