set_one,matrix-method

numeric <code>matrix</code> representing the network adjacency matrix.

This function sets all entries in a <code>matrix</code> bigger than 1 to 1 and all entries 
smaller than -1 to -1. It is called by <code><a rd-options="" href="/link/get_network_matrix?package=kangar00&version=1.4" data-mini-rdoc="kangar00::get_network_matrix">get_network_matrix</a></code>.
(For internal use)

internal

Methods to extract information on pathways, genes and various single-nucleotid polymorphisms (SNPs) from online databases. It provides functions for data preparation and evaluation of genetic influence on a binary outcome using the logistic kernel machine test (LKMT). Three different kernel functions are offered to analyze genotype information in this variance component test: A linear kernel, a size-adjusted kernel and a network-based kernel (Friedrichs et al., 2017, <doi:10.1155/2017/6742763>).

Juliane Manitz

kangar00

Kernel Approaches for Nonlinear Genetic Association Regression

set_one,matrix-method function

This function sets all entries in a <code>matrix</code> bigger than 1 to 1 and all entries 
smaller than -1 to -1. It is called by <code><a rd-options='' href='get_network_matrix'>get_network_matrix</a></code>.
(For internal use)

set_one,matrix-method: Helper function to set `matrix` entries to 0/1/-1 only

Description

Usage

Arguments

Value

See Also