kinfit v1.1.14
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Routines for Fitting Kinetic Models to Chemical Degradation Data
The FOCUS Kinetics Report first published in 2006 describes mathematical
models and recommends statistical methods for the evaluation of
chemical degradation data. This package implements fitting the kinetic
models suitable for observations of the decline of a single chemical
compound (no metabolite formation/decline or multi-compartment kinetics).
Please note that no warranty is implied for correctness of results or
fitness for a particular purpose. 'kinfit' is maintained, but not
actively developed at the moment. Please check the 'mkin' package for an
actively developed package for kinetic evaluations of degradation data.
Functions in kinfit
| Name | Description | |
| FOMC | First-Order Multi-Compartment kinetics | |
| FOCUS_2006_FOMC_ref_A_to_F | Results of fitting the FOMC model to Datasets A to F of FOCUS (2006) | |
| FOCUS_2006_A | Dataset A from the FOCUS Kinetics report from 2006 | |
| FOCUS_2006_E | Dataset E from the FOCUS Kinetics report from 2006 | |
| FOCUS_2006_B | Dataset B from the FOCUS Kinetics report from 2006 | |
| kinerrmin | Calculate the minimum error to assume in order to pass the variance test | |
| FOCUS_2006_SFO_ref_A_to_F | Results of fitting the SFO model to Datasets A to F of FOCUS (2006) | |
| FOCUS_2006_F | Water sediment study dataset F from the FOCUS Kinetics report from 2006 | |
| FOCUS_2006_DFOP_ref_A_to_B | Results of fitting the DFOP model to Datasets A to B of FOCUS (2006) | |
| FOCUS_2006_HS_ref_A_to_F | Results of fitting the HS model to Datasets A to F of FOCUS (2006) | |
| kinobjects | Creates list of objects, each representing a kinetic experiment or trial | |
| HS | Hockey-Stick kinetics | |
| FOCUS_2006_D | Dataset D from the FOCUS Kinetics report from 2006 | |
| kinfit | Fit kinetic models to chemical degradation data | |
| kinresults | Function to collect useful results for a set of fitted kinetic models | |
| kinobject | Creates list representing a kinetic experiment or trial | |
| SFO | Single First-Order kinetics | |
| kinplot | Creates a plot of the kinetic fits | |
| kinresplot | Creates a plot of the residual for specified kinetic fits | |
| DFOP | Double First-Order in Parallel kinetics | |
| kinreport | Creates a report of the kinetic fits | |
| kinwrite.KinGUI | Function to write KinGUI input files from kinetic data | |
| FOCUS_2006_C | Dataset C from the FOCUS Kinetics report from 2006 | |
| No Results! | ||
Vignettes of kinfit
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Details
| Type | Package |
| Date | 2015-07-03 |
| License | GPL |
| LazyLoad | yes |
| LazyData | yes |
| URL | http://cran.r-project.org, http://kinfit.r-forge.r-project.org |
| NeedsCompilation | no |
| Packaged | 2015-07-03 13:04:38 UTC; jranke |
| Repository | CRAN |
| Date/Publication | 2015-07-04 08:38:42 |
| imports | graphics , stats , utils |
| Contributors | Johannes Ranke, Katrin Lindenberger |
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