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lcc (version 1.0)

Longitudinal Concordance Correlation

Description

Estimates the longitudinal concordance correlation to access the longitudinal agreement profile. The estimation approach implemented is variance components approach based on polynomial mixed effects regression model, as proposed by Oliveira, Hinde and Zocchi (2018) . In addition, non-parametric confidence intervals were implemented using percentile method or normal-approximation based on Fisher Z-transformation.

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Version

Install

install.packages('lcc')

Monthly Downloads

187

Version

1.0

License

GPL (>= 2)

Maintainer

Thiago de Paula Oliveira

Last Published

November 16th, 2018

Functions in lcc (1.0)

Internal function to prepare the ciCompute function.

Internal function to prepare lccModel function

plotBuilder_lpc

Internal function to produces a longitudinal Perason correlation plot.

Internal function to summarize fitted and sampled values for lcc objects

Internal functions to generate longitudinal accuracy samples.

Internal function to compute the non-parametric bootstrap interval.

Internal function to to prepare the laBuilder function

Internal functions to generate longitudinal Pearson correlation samples.

Internal functions to compute the non-parametric confidence intervals for LCC.

Internal function to to prepare the lccBuilder function

Regular sequence for the time variable

Internal functions to generate longitudinal concordance correlation samples.

Internal function to estimate the longitudinal Pearson correlation.

Longitudinal Concordance Correlation (LCC) estimated by fixed effects and variance components of polynomial mixed-effects regression model

Internal function to compute the sampled concordance correlation values.

Specifying graphical control values for lcc class

Internal function to estimate the sampled Pearson correlation.

bootstrapSamples

Internal functions to estimate fixed effects and variance components.

Internal function to fits a linear mixed-effects model in the formulation described in Laird and Ware (1982).

Internal function to prepare the plotBuilder_la function.

Internal function to prepare the plotBuilder_lcc function.

Internal function to to prepare the lpcBuilder function

Summarize an lcc object

Plot an lcc object

Internal function to produces a longitudinal accuracy plot.

simulated_hue_block

Hue color simulated data in a randomized block design

Internal function to estimate the sampled concordance correlation coefficient.

plotBuilder_lcc

Internal function to produces a longitudinal concordance correlation plot.

Internal function to estimate the longitudinal concordance correlation.

Internal function to prepare lcc objects

Internal function to prepare the plotBuilder_lpc function.

Hue color simulated data

Internal functions to generate bootstrap samples based on dataset.

Internal function to prepare the dataset for lcc objects

Internal function to extract variance components estimate.

Internal function to estimate the longitudinal accuracy.