full_sc_lhood

Reference implementation used for parity checks and validation.
For production estimation, prefer <code>full_sc_lhood_fast()</code>.

internal

A suite of tools for estimating, assessing model fit, simulating from, and visualizing location dependent marked point processes characterized by regularity in the pattern.
You provide a reference marked point process, a set of raster images containing location specific covariates, and select the estimation algorithm and type of mark model.
'ldmppr' estimates the process and mark models and allows you to check the appropriateness of the model using a variety of diagnostic tools.
Once a satisfactory model fit is obtained, you can simulate from the model and visualize the results.
Documentation for the package 'ldmppr' is available in the form of a vignette.

Lane Drew

ldmppr

Estimate and Simulate from Location Dependent Marked Point
Processes

Andee Kaplan

full_sc_lhood function

<dl><dt>xgrid</dt>
<dd>NumericVector of x-grid values.</dd>
<dt>ygrid</dt>
<dd>NumericVector of y-grid values.</dd>
<dt>tgrid</dt>
<dd>NumericVector of integration-time grid values.</dd>
<dt>tobs</dt>
<dd>NumericVector of observed event times.</dd>
<dt>data</dt>
<dd>NumericMatrix with columns (time, x, y), sorted by nondecreasing time.</dd>
<dt>params</dt>
<dd>NumericVector of model parameters
(alpha1, beta1, gamma1, alpha2, beta2, alpha3, beta3, gamma3).</dd>
<dt>bounds</dt>
<dd>NumericVector of integration bounds (bt, bx, by).</dd></dl>

Arguments

Evaluate reference self-correcting log-likelihood — full_sc_lhood

<dl>

<dt>xgrid</dt>
<dd>NumericVector of x-grid values.</dd>


<dt>ygrid</dt>
<dd>NumericVector of y-grid values.</dd>


<dt>tgrid</dt>
<dd>NumericVector of integration-time grid values.</dd>


<dt>tobs</dt>
<dd>NumericVector of observed event times.</dd>


<dt>data</dt>
<dd>NumericMatrix with columns (time, x, y), sorted by nondecreasing time.</dd>


<dt>params</dt>
<dd>NumericVector of model parameters
(alpha1, beta1, gamma1, alpha2, beta2, alpha3, beta3, gamma3).</dd>


<dt>bounds</dt>
<dd>NumericVector of integration bounds (bt, bx, by).</dd>

</dl>

full_sc_lhood: Evaluate reference self-correcting log-likelihood

Description

Usage

Value

Arguments