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letsR (version 1.0)

Tools for data handling and analysis in macroecology

Description

R functions for handling and analyzing geographic data, mainly species' geographic distributions (in ESRI shapefile format) and environmental variables (in raster format), as well as species' information related to their description (e.g. taxonomy and year of description) and conservation status (e.g. category of threat, population trend) as provided by the IUCN's RedList database. The package includes functions to create presence-absence matrices based on species distributions and user-defined grid systems, from which several other functions could be applied to generate, for example, species richness rasters and maps, and geographical midpoints of species. In addition, it provides a function to create spatial correlograms of variables, based on the Moran's I index, under the equiprobable or equidistant criterion to define distance classes.

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Version

Install

install.packages('letsR')

Monthly Downloads

308

Version

1.0

License

GPL-2

Maintainer

Bruno Vilela

Last Published

May 19th, 2014

Functions in letsR (1.0)

lets.presab.birds

Shapefiles to presence/absence matrix by folder location
iucn

IUCN avaliation for frogs of Phyllomedusa genera
lets.field

Create variables based on species geographical ranges
lets.addvar

Add variables to a PresenceAbscence object
lets.addpoly

Add polygon values to a PresenceAbscence object
lets.correl

Compute correlogram based on Moran's I
lets.midpoint

Species' geographical range midpoint
lets.presab

Shapefiles into a presence-absence matrix
PAM

PresenceAbsence object for frogs of Phyllomedusa genera
plot.PresenceAbsence

Plot an object of class PresenceAbsence
lets.maplizer

Create a matrix summarizing species' attributes
Phyllomedusa

Geographic distribution of Phyllomedusa genera
summary.PresenceAbsence

Summary for object of class PresenceAbsence
lets.shFilter

Shapefiles filtering
lets.iucn.ha

Download habitat information for species from IUCN
letsR

Tools for data handling and analysis in macroecology.
lets.iucn.his

Download historical conservation status of species from IUCN
print.PresenceAbsence

Print for object of class PresenceAbsence
lets.transf

Transform values of a vector
lets.iucncont

Transform IUCN conservation status to continuous values
print.summary.PresenceAbsence

Print summary for object of class PresenceAbsence
lets.iucn

Download species' information from IUCN
temp

Avarege temperature raster for the world