lfc (version 0.2.3)

PsiLFC.se: Psi LFC effect size estimator

Description

Computes the optimal effect size estimate and credible intervals if needed for a Bioconductor SummarizedExperiment object

Usage

PsiLFC.se(se, contrast, cre = FALSE)

Value

Either a vector containing the estimates, or a data frame containing the credible interval as well

Arguments

se

SummarizedExperiment object

contrast

Vector of length 3 (<name>,<A>,<B>)

cre

Compute credible intervals as well? (can also be a vector of quantiles)

Examples

if (FALSE) {
   data(airway, package="airway")
   head(PsiLFC.se(airway,contrast=c("dex","untrt","trt")))
}