RDocumentation
Moon
Learn R
Search all packages and functions
⚠️
There's a newer version (1.8) of this package.
Take me there.
lgcp (version 0.9-2)
Log-Gaussian Cox Process
Description
Spatial and spatio-temporal modelling of point patterns using the log-Gaussian Cox process
Copy Link
Copy
Link to current version
Version
Version
1.8
1.6
1.5
1.4
1.3-15
1.3-14
1.3-13
1.3-11
1.3-9
1.3-8
1.3-7
1.3-6
1.3-4
1.3-3
1.3-2
1.3-1
1.01
1.0
0.9-7
0.9-5
0.9-4-2
0.9-3
0.9-2
0.9-1
0.9-0
Down Chevron
Install
install.packages('lgcp')
Monthly Downloads
999
Version
0.9-2
License
GPL-3
Maintainer
Benjamin Taylor
Last Published
March 12th, 2012
Functions in lgcp (0.9-2)
Search functions
GFfinalise.nullFunction
GFfinalise...
GFupdate.dump2dir
GFupdate...
Extract.stppp
Extract...
affine.SpatialPolygonsDataFrame
affine...
GAreturnvalue
GAreturnvalue function...
as.list.lgcpgrid
as...
as.ppp.stppp
as...
hvals
hvals function...
SpatialPolygonsDataFrame.stapp
SpatialPolygonsDataFrame...
add.list
add...
as.owinlist.stapp
as...
dump2dir
dump2dir function...
GAinitialise
GAinitialise function...
getCounts
getCounts function...
circulant.matrix
circulant...
GAreturnvalue.MonteCarloAverage
GAreturnvalue...
hasNext
generic hasNext method...
image.lgcpgrid
image...
computeGradtruncSpatioTemporal
computeGradtruncSpatioTemporal function...
MALAlgcpSpatial
MALAlgcpSpatial function...
hvals.lgcpPredict
hvals...
getlgcpPredictSpatialINLA
getlgcpPredictSpatialINLA function...
loop.mcmc
loop over an iterator...
identifygrid
identifygrid function...
showGrid.stppp
showGrid...
gridInWindow
gridInWindow function...
spatialAtRisk.function
spatialAtRisk...
as.stppp
as...
thetaEst
thetaEst function...
is.burnin
is this a burn-in iteration?
mcmcProgressPrint
printing progress monitor...
lambdaEst
lambdaEst function...
iteration
iteration number...
muEst
muEst function...
window.lgcpPredict
window...
spatialAtRisk.default
spatialAtRisk...
matchcovariance
matchcovariance function...
meanfield.lgcpPredictINLA
meanfield...
serr
serr function...
loc2poly
loc2poly function...
xvals.lgcpPredict
xvals...
nextStep
next step of an MCMC chain...
plot.lgcpQuantiles
plot...
lgcpgrid.list
lgcpgrid...
plot.stppp
plot...
spatialAtRisk.fromXYZ
spatialAtRisk...
zvals.default
zvals...
quantile.lgcpPredict
quantile...
resetLoop
reset iterator...
plotExceed.array
plotExceed...
smultiply.list
smultiply...
GAinitialise.nullAverage
GAinitialise...
GammafromY
GammafromY function...
GFinitialise.nullFunction
GFinitialise...
as.fromXYZ.fromFunction
as...
fftinterpolate.fromFunction
fftinterpolate...
exceedProbsAggregated
exceedProbsAggregated function...
YfromGamma
YfromGamma function...
selectObsWindow.default
selectObsWindow...
stppp.ppp
stppp...
evallogprobY
evallogprobY function...
plotExceed
plotExceed function...
plot.fromXYZ
plot...
gu
gu function...
spatialAtRisk.SpatialPolygonsDataFrame
spatialAtRisk...
wtowns
Welsh town details: population
print.dump2dir
print...
yvals.default
yvals...
print.stapp
print...
computeGradtrunc
computeGradtrunc function...
fftinterpolate
fftinterpolate function...
normsq
normsq function...
roteffgain
roteffgain function...
showGrid
showGrid function...
GAfinalise.nullAverage
GAfinalise...
summary.lgcpgrid
summary...
affine.fromXYZ
affine...
as.stppp.stapp
as...
GFreturnvalue.nullFunction
GFreturnvalue...
extract.lgcpPredict
extract...
diffnorm2
diffnorm2 function...
intens.lgcpPredict
intens...
intens
intens function...
lgcp
lgcp...
nullAverage
nullAverage function...
mcmcLoop
iterator for MCMC loops...
print.temporalAtRisk
print...
print.stppp
print...
setTxtProgressBar2
set the progress bar...
stppp
stppp function...
rr
rr function...
toral.cov.mat
toral...
setoutput
setoutput function...
spatialAtRisk.SpatialGridDataFrame
spatialAtRisk...
stapp.list
stapp...
xvals.SpatialGridDataFrame
xvals...
wtowncoords
Welsh town details: location
expectation.lgcpPredict
expectation...
as.fromXYZ
as...
as.im.fromFunction
as...
MonteCarloAverage
MonteCarloAverage function...
bt.scalar
bt...
fftgrid
fftgrid function...
paramprec
paramprec function...
extract
extract function...
print.fromXYZ
print...
lgcpSimSpatial
lgcpSimSpatial function...
gridav
gridav function...
mcmcProgressNone
null progress monitor...
yvals.lgcpPredict
yvals...
initialiseAMCMC.andrieuthomsh
initaliseAMCMC...
getRotation.default
getRotation...
lgcpSim
lgcpSim function...
GFupdate
GFupdate function...
initialiseAMCMC.constanth
initaliseAMCMC...
target.and.grad.spatiotemporal
target...
GFreturnvalue.dump2dir
GFreturnvalue...
affine.fromSPDF
affine...
GFfinalise
GFfinalise function...
xvals.default
xvals...
zvals.fromXYZ
zvals...
circulant.numeric
circulant...
circulant
circulant function...
yvals.fromXYZ
yvals...
as.owinlist.SpatialPolygonsDataFrame
as...
affine.fromFunction
affine...
temporalAtRisk.numeric
temporalAtRisk...
mcmcProgressTextBar
text bar progress monitor...
density.stppp
density...
expectation
expectation function...
identify.lgcpPredict
identify...
meanfield.lgcpPredict
meanfield...
nullFunction
nullFunction function...
print.lgcpPredict
print...
quantile.lgcpgrid
quantile...
temporalAtRisk.function
temporalAtRisk...
target.and.grad
target...
txtProgressBar2
txtProgressBar2
varfield.lgcpPredict
varfield...
updateAMCMC
updateAMCMC function...
Cvb
Cvb function...
GAupdate.nullAverage
GAupdate...
MALAlgcp
MALAlgcp function...
GFupdate.nullFunction
GFupdate...
print.fromSPDF
print...
constanth
constanth function...
constantInTime.numeric
constantInTime...
spatialAtRisk.bivden
spatialAtRisk...
selectObsWindow
selectObsWindow function...
spatialAtRisk
spatialAtRisk function...
updateAMCMC.constanth
updateAMCMC...
xvals
xvals function...
GFinitialise
GFinitialise function...
blockcircbase
blockcircbase function...
fftinterpolate.fromXYZ
interpolate...
getRotation.stppp
getRotation...
as.owinlist
as...
lgcpgrid.matrix
lgcpgrid...
mcmcProgressTk
graphical progress monitor...
plot.fromSPDF
plot...
proposal.means
proposal...
rescale.stppp
rescale...
spatialIntensities.fromXYZ
spatialIntensities...
stapp.SpatialPolygonsDataFrame
stapp...
KinhomAverage
KinhomAverage function...
as.owin.stapp
as...
constantInTime.stppp
constantInTime...
ginhomAverage
ginhomAverage function...
is.retain
do we retain this iteration?
lgcpPredictAggregated
lgcpPredictAggregated function...
plot.temporalAtRisk
plot...
print.mcmc
print...
rotmat
rotmat function...
spatialparsEst
spatialparsEst function...
lgcpPredictSpatialINLA
lgcpPredictSpatialINLA function...
hasNext.iter
hasNext...
lgcpPredictSpatial
lgcpPredictSpatial function...
mcmctrace.lgcpPredict
mcmctrace...
serr.lgcpPredict
serr...
stapp
stapp function...
summary.mcmc
summary...
updateAMCMC.andrieuthomsh
updateAMCMC...
varfield
varfield function...
as.SpatialGridDataFrame.fromXYZ
as...
fftinterpolate.fromSPDF
fftinterpolate...
print.fromFunction
print...
selectObsWindow.stppp
selectObsWindow...
spatialAtRisk.im
spatialAtRisk...
GAinitialise.MonteCarloAverage
GAinitialise...
temporalAtRisk
temporalAtRisk function...
plotExceed.lgcpPredict
plotExceed...
GAupdate.MonteCarloAverage
GAupdate...
GAreturnvalue.nullAverage
GAreturnvalue...
andrieuthomsh
andrieuthomsh function...
GFreturnvalue
GFreturnvalue function...
eigenfrombase
eigenfrombase function...
gridfun
gridfun function...
as.im.fromSPDF
as...
gridfun.lgcpPredict
gridfun...
lgcpgrid.array
lgcpgrid...
meanselect
meanselect function...
getRotation
getRotation function...
grad.comp
grad...
as.SpatialGridDataFrame
as...
gridav.lgcpPredict
gridav...
at
at function...
initialiseAMCMC
initialiseAMCMC function...
plot.lgcpgrid
plot...
print.lgcpgrid
print...
showGrid.lgcpPredict
showGrid...
lgcpPredict
lgcpPredict function...
is.SPD
is...
meanfield
meanfield function...
neattable
neattable function...
mcmctrace
mcmctrace function...
showGrid.default
showGrid...
plot.mcmcdiag
plot...
rr.lgcpPredict
rr...
target.and.grad.spatial
target...
wpopdata
Population of Welsh counties
xvals.fromXYZ
xvals...
GAfinalise
GAfinalise function...
constantInTime
constantInTime function...
GAfinalise.MonteCarloAverage
GAfinalise...
GAupdate
GAupdate function...
sparsebase
sparsebase function...
stppp.list
stppp...
inversebase
inversebase function...
varfield.lgcpPredictINLA
varfield...
is.pow2
is...
zvals
zvals function...
lgcppars
lgcppars function...
mcmcpars
mcmcpars function...
lgcpgrid
lgcpgrid function...
multiply.list
multiply...
paramprecbase
paramprecbase function...
print.gridaverage
print...
zvals.SpatialGridDataFrame
zvals...
yvals
yvals function...
GFfinalise.dump2dir
GFfinalise...
GFinitialise.dump2dir
GFinitialise...
as.im.fromXYZ
as...
affine.stppp
affine...
computeGradtruncSpatial
computeGradtruncSpatial function...
exceedProbs
exceedProbs function...
d.func
d...
lgcpForecast
lgcpForecast function...
plot.lgcpPredict
plot...
neigh2D
neigh2D function...
spatialIntensities
spatialIntensities function...
spatialIntensities.fromSPDF
spatialIntensities...
yvals.SpatialGridDataFrame
yvals...