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lgcp (version 0.9-5)

Log-Gaussian Cox Process

Description

Spatial and spatio-temporal modelling of point patterns using the log-Gaussian Cox process

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Version

Install

install.packages('lgcp')

Monthly Downloads

822

Version

0.9-5

License

GPL-3

Maintainer

Benjamin Taylor

Last Published

June 11th, 2012

Functions in lgcp (0.9-5)

GAupdate.MonteCarloAverage

GAupdate...

expectation.lgcpPredict

exceedProbs function...

nextStep

next step of an MCMC chain...

as.fromXYZ.fromFunction

as...

showGrid.stppp

showGrid...

fftinterpolate.fromSPDF

spatialIntensities.fromXYZ

spatialIntensities...

nullAverage function...

hasNext

generic hasNext method...

iterator for MCMC loops...

spatialAtRisk.SpatialPolygonsDataFrame

spatialAtRisk...

spatialIntensities.fromSPDF

spatialIntensities...

wtowncoords

Welsh town details: location

GAfinalise.nullAverage

GAfinalise...

KinhomAverage

KinhomAverage function...

GFinitialise

GFinitialise function...

at function...

as.SpatialGridDataFrame

lgcpForecast function...

lgcpSim

lgcpSim function...

mcmcProgressTk

graphical progress monitor...

GAinitialise.MonteCarloAverage

plotExceed function...

zvals.fromXYZ

zvals...

GAinitialise.nullAverage

GAinitialise...

GAreturnvalue.nullAverage

GAinitialise function...

as.SpatialGridDataFrame.fromXYZ

as...

gridInWindow

gridInWindow function...

getRotation

getRotation function...

image.lgcpgrid

image...

is.retain

do we retain this iteration?

lgcpgrid.array

lgcpgrid...

mcmcProgressNone

null progress monitor...

meanfield.lgcpPredictINLA

paramprec function...

circulant function...

.onAttach

selectObsWindow

selectObsWindow function...

constantInTime

constantInTime function...

plotExceed.lgcpPredict

plotExceed...

target.and.grad.spatiotemporal

target...

intens.lgcpPredict

intens...

SpatialPolygonsDataFrame.stapp

SpatialPolygonsDataFrame...

YfromGamma

YfromGamma function...

getlgcpPredictSpatialINLA

getlgcpPredictSpatialINLA function...

GFfinalise.nullFunction

GFfinalise...

hasNext.iter

hasNext...

GFreturnvalue.nullFunction

GFreturnvalue...

MonteCarloAverage

MonteCarloAverage function...

lgcpPredict

lgcpPredict function...

as.owinlist.SpatialPolygonsDataFrame

fftinterpolate.fromFunction

text bar progress monitor...

GAreturnvalue function...

mcmcProgressPrint

printing progress monitor...

matchcovariance function...

loop over an iterator...

loc2poly

loc2poly function...

spatialAtRisk

spatialAtRisk function...

temporalAtRisk.function

temporalAtRisk...

integerise

integerise function...

discreteWindow.lgcpPredict

discreteWindow...

discreteWindow

discreteWindow function...

neattable function...

multiply.list

multiply...

mcmctrace

mcmctrace function...

spatialAtRisk.SpatialGridDataFrame

spatialAtRisk...

selectObsWindow.default

stapp.SpatialPolygonsDataFrame

stapp...

GammafromY

GammafromY function...

summary.lgcpgrid

summary...

temporalAtRisk

temporalAtRisk function...

spatialparsEst

spatialparsEst function...

affine.SpatialPolygonsDataFrame

Welsh town details: population

computeGradtruncSpatioTemporal

computeGradtruncSpatioTemporal function...

updateAMCMC

updateAMCMC function...

initialiseAMCMC.andrieuthomsh

temporalAtRisk.numeric

temporalAtRisk...

GAreturnvalue.MonteCarloAverage

GAreturnvalue...

GFreturnvalue.dump2dir

GFreturnvalue...

ginhomAverage

ginhomAverage function...

identifygrid

identifygrid function...

selectObsWindow.stppp

GFfinalise function...

constanth

constanth function...

getCounts

getCounts function...

computeGradtruncSpatial

computeGradtruncSpatial function...

lgcpPredictSpatialINLA

lgcpPredictSpatialINLA function...

GAfinalise

GAfinalise function...

inversebase function...

lgcpPredictAggregated

lgcpPredictAggregated function...

wpopdata

Population of Welsh counties

updateAMCMC.andrieuthomsh

GFupdate.nullFunction

GFupdate...

affine.fromFunction

affine...

fftinterpolate.fromXYZ

lgcpPredictSpatial function...

neigh2D

neigh2D function...

mcmctrace.lgcpPredict

spatialAtRisk.fromXYZ

spatialAtRisk...

setTxtProgressBar2

set the progress bar...

stppp.ppp

stppp...

varfield.lgcpPredictINLA

GFinitialise.dump2dir

meanfield.lgcpPredict

spatialAtRisk.function

spatialAtRisk...

xvals.SpatialGridDataFrame

xvals...

varfield

varfield function...

yvals.SpatialGridDataFrame

yvals...

GFinitialise.nullFunction

initialiseAMCMC function...

paramprecbase function...

spatialIntensities

spatialIntensities function...

GFreturnvalue function...

sparsebase

sparsebase function...

zvals.SpatialGridDataFrame

zvals...

eigenfrombase

eigenfrombase function...

yvals.default

yvals...

fftinterpolate

fftinterpolate function...

zvals.default

zvals...

updateAMCMC.constanth

updateAMCMC...

gu function...

is.burnin

is this a burn-in iteration?

lambdaEst

lambdaEst function...

rotmat

rotmat function...

meanfield

meanfield function...

blockcircbase function...

exceedProbsAggregated

exceedProbsAggregated function...

expectation

expectation function...

lgcp

lgcp...

setoutput

setoutput function...

lgcpSimSpatial

lgcpSimSpatial function...

nullFunction

nullFunction function...

target.and.grad.spatial

target...

GAfinalise.MonteCarloAverage

GAfinalise...

MALAlgcpSpatial

MALAlgcpSpatial function...

andrieuthomsh

andrieuthomsh function...

constantInTime.stppp

constantInTime...

initialiseAMCMC.constanth

initaliseAMCMC...

integerise.stppp

integerise...

spatialAtRisk.default

spatialAtRisk...

constantInTime.numeric

constantInTime...

roteffgain

roteffgain function...