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lgcp (version 0.9-7)

Log-Gaussian Cox Process

Description

Spatial and spatio-temporal modelling of point patterns using the log-Gaussian Cox process

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Version

Install

install.packages('lgcp')

Monthly Downloads

822

Version

0.9-7

License

GPL-3

Maintainer

Benjamin Taylor

Last Published

July 20th, 2012

Functions in lgcp (0.9-7)

yvals.default

yvals...

GFfinalise.nullFunction

GFfinalise...

zvals.SpatialGridDataFrame

zvals...

xvals

xvals function...

affine.SpatialPolygonsDataFrame

fftinterpolate function...

.onAttach

fftinterpolate.fromFunction

fftinterpolate...

expectation.lgcpPredict

expectation...

hasNext

generic hasNext method...

iterator for MCMC loops...

mcmcProgressPrint

printing progress monitor...

selectObsWindow function...

GAfinalise.nullAverage

GAfinalise...

spatialIntensities.fromSPDF

spatialIntensities...

YfromGamma

YfromGamma function...

toral.cov.mat

toral...

expectation

expectation function...

as.SpatialGridDataFrame.fromXYZ

neattable function...

GAinitialise function...

eigenfrombase function...

computeGradtruncSpatioTemporal

computeGradtruncSpatioTemporal function...

getlgcpPredictSpatialINLA

getlgcpPredictSpatialINLA function...

constanth

constanth function...

null progress monitor...

mcmcProgressTextBar

text bar progress monitor...

plotExceed.lgcpPredict

target.and.grad.spatiotemporal

target...

xvals.default

xvals...

GAinitialise.nullAverage

GAinitialise...

GFfinalise.dump2dir

GFfinalise...

GFreturnvalue.nullFunction

GFreturnvalue...

as.SpatialGridDataFrame

lambdaEst function...

as.fromXYZ.fromFunction

as...

GAfinalise.MonteCarloAverage

GAfinalise...

constantInTime

constantInTime function...

computeGradtruncSpatial

computeGradtruncSpatial function...

spatialAtRisk.SpatialGridDataFrame

spatialAtRisk...

spatialAtRisk.function

spatialAtRisk...

fftinterpolate.fromXYZ

fftinterpolate.fromSPDF

identifygrid function...

mcmcProgressTk

graphical progress monitor...

meanfield function...

yvals.SpatialGridDataFrame

yvals...

inversebase

inversebase function...

lgcpForecast

lgcpForecast function...

spatialAtRisk.SpatialPolygonsDataFrame

temporalAtRisk function...

spatialAtRisk.fromXYZ

spatialAtRisk...

temporalAtRisk.numeric

temporalAtRisk...

getCounts

getCounts function...

GFinitialise function...

as.SpatialPixelsDataFrame.lgcpgrid

as...

discreteWindow.lgcpPredict

discreteWindow...

gridfun

gridfun function...

selectObsWindow.stppp

spatialIntensities function...

xvals.SpatialGridDataFrame

xvals...

nullFunction

nullFunction function...

Welsh town details: location

meanfield.lgcpPredict

GammafromY function...

discreteWindow

discreteWindow function...

gridav

gridav function...

sparsebase

sparsebase function...

integerise function...

is.retain

do we retain this iteration?

GAupdate

GAupdate function...

lgcpPredictSpatial

lgcpPredictSpatial function...

KinhomAverage

KinhomAverage function...

plot.fromSPDF

plot...

updateAMCMC.constanth

mcmctrace.lgcpPredict

mcmctrace...

setoutput

setoutput function...

stppp.ppp

stppp...

varfield.lgcpPredictINLA

varfield...

spatialparsEst

spatialparsEst function...

andrieuthomsh function...

exceedProbsAggregated

exceedProbsAggregated function...

gridInWindow

gridInWindow function...

zvals

zvals function...

getRotation

getRotation function...

print.fromXYZ

print...

target.and.grad.spatial

target...

GFfinalise

GFfinalise function...

SpatialPolygonsDataFrame.stapp

SpatialPolygonsDataFrame...

GAreturnvalue.nullAverage

GAreturnvalue...

smultiply.list

smultiply...

GFinitialise.nullFunction

GFinitialise...

spatialAtRisk.default

MALAlgcpSpatial function...

as.SpatialPixelsDataFrame

updateAMCMC function...

circulant

circulant function...

constantInTime.numeric

is this a burn-in iteration?

nextStep

next step of an MCMC chain...

lgcpSimSpatial function...

setTxtProgressBar2

set the progress bar...

varfield

varfield function...

meanfield.lgcpPredictINLA

meanfield...

plot.lgcpPredict

plot...

stapp.SpatialPolygonsDataFrame

stapp...

yvals.fromXYZ

yvals...

GAupdate.MonteCarloAverage

GAupdate...

GFupdate

GFupdate function...

GFreturnvalue.dump2dir

GFreturnvalue...

as.owinlist.SpatialPolygonsDataFrame

as...

exceedProbs

exceedProbs function...

hasNext.iter

hasNext...

lgcpPredictAggregated

lgcpPredictAggregated function...

nullAverage function...

plotExceed

plotExceed function...

wpopdata

Population of Welsh counties

temporalAtRisk.function

temporalAtRisk...

paramprecbase

paramprecbase function...

wtowns

Welsh town details: population

constantInTime.stppp

constantInTime...

ginhomAverage

ginhomAverage function...

lgcpgrid.array

lgcpgrid...

GAfinalise

GAfinalise function...

GAreturnvalue

GAreturnvalue function...

gridfun.lgcpPredict

gridfun...

matchcovariance

matchcovariance function...

muEst

muEst function...

paramprec

paramprec function...

spatialAtRisk

spatialAtRisk function...

stppp

stppp function...

GFinitialise.dump2dir

GFinitialise...

MonteCarloAverage

MonteCarloAverage function...

getCellCounts function...

lgcpPredictSpatialINLA

lgcpPredictSpatialINLA function...

roteffgain function...

updateAMCMC.andrieuthomsh

updateAMCMC...

GAreturnvalue.MonteCarloAverage

GAreturnvalue...

GFreturnvalue

GFreturnvalue function...

affine.fromSPDF

affine...

blockcircbase

blockcircbase function...

initialiseAMCMC.constanth

initaliseAMCMC...

initialiseAMCMC

initialiseAMCMC function...

lgcpgrid.list

lgcpgrid...

loop.mcmc

loop over an iterator...

showGrid.stppp

showGrid...

mcmctrace

mcmctrace function...

GFupdate.dump2dir

GFupdate...

spatialIntensities.fromXYZ

spatialIntensities...

lgcpPredict

lgcpPredict function...

GAinitialise.MonteCarloAverage

GAinitialise...

yvals

yvals function...

GFupdate.nullFunction

initialiseAMCMC.andrieuthomsh

selectObsWindow.default