RDocumentation
Moon
Learn R
Search all packages and functions
⚠️
There's a newer version (1.8) of this package.
Take me there.
lgcp (version 0.9-7)
Log-Gaussian Cox Process
Description
Spatial and spatio-temporal modelling of point patterns using the log-Gaussian Cox process
Copy Link
Copy
Link to current version
Version
Version
1.8
1.6
1.5
1.4
1.3-15
1.3-14
1.3-13
1.3-11
1.3-9
1.3-8
1.3-7
1.3-6
1.3-4
1.3-3
1.3-2
1.3-1
1.01
1.0
0.9-7
0.9-5
0.9-4-2
0.9-3
0.9-2
0.9-1
0.9-0
Down Chevron
Install
install.packages('lgcp')
Monthly Downloads
1,097
Version
0.9-7
License
GPL-3
Maintainer
Benjamin Taylor
Last Published
July 20th, 2012
Functions in lgcp (0.9-7)
Search functions
yvals.default
yvals...
GFfinalise.nullFunction
GFfinalise...
zvals.SpatialGridDataFrame
zvals...
xvals
xvals function...
affine.SpatialPolygonsDataFrame
affine...
as.im.fromSPDF
as...
GAupdate.nullAverage
GAupdate...
as.list.lgcpgrid
as...
as.fromXYZ
as...
as.stppp.stapp
as...
fftgrid
fftgrid function...
fftinterpolate
fftinterpolate function...
.onAttach
.onAttach
fftinterpolate.fromFunction
fftinterpolate...
expectation.lgcpPredict
expectation...
hasNext
generic hasNext method...
gu
gu function...
intens.lgcpPredict
intens...
mcmcLoop
iterator for MCMC loops...
mcmcProgressPrint
printing progress monitor...
lgcppars
lgcppars function...
print.dump2dir
print...
selectObsWindow
selectObsWindow function...
print.lgcpPredict
print...
stapp.list
stapp...
xvals.fromXYZ
xvals...
window.lgcpPredict
window...
as.owin.stapp
as...
spatialAtRisk.im
spatialAtRisk...
GAfinalise.nullAverage
GAfinalise...
spatialIntensities.fromSPDF
spatialIntensities...
YfromGamma
YfromGamma function...
toral.cov.mat
toral...
expectation
expectation function...
as.SpatialGridDataFrame.fromXYZ
as...
lgcp
lgcp...
neattable
neattable function...
print.stppp
print...
quantile.lgcpPredict
quantile...
showGrid.default
showGrid...
GAinitialise
GAinitialise function...
affine.fromFunction
affine...
as.ppp.stppp
as...
eigenfrombase
eigenfrombase function...
computeGradtruncSpatioTemporal
computeGradtruncSpatioTemporal function...
getlgcpPredictSpatialINLA
getlgcpPredictSpatialINLA function...
constanth
constanth function...
gridav.lgcpPredict
gridav...
lambdaEst.stppp
lambdaEst...
lgcpSim
lgcpSim function...
mcmcProgressNone
null progress monitor...
mcmcProgressTextBar
text bar progress monitor...
plotExceed.lgcpPredict
plotExceed...
raster.lgcpgrid
raster...
rotmat
rotmat function...
target.and.grad.spatiotemporal
target...
xvals.default
xvals...
GAinitialise.nullAverage
GAinitialise...
GFfinalise.dump2dir
GFfinalise...
GFreturnvalue.nullFunction
GFreturnvalue...
as.SpatialGridDataFrame
as...
circulant.numeric
circulant...
bt.scalar
bt...
lambdaEst
lambdaEst function...
as.fromXYZ.fromFunction
as...
GAfinalise.MonteCarloAverage
GAfinalise...
constantInTime
constantInTime function...
computeGradtruncSpatial
computeGradtruncSpatial function...
plot.lgcpAutocorr
plot...
quantile.lgcpgrid
quantile...
spatialAtRisk.SpatialGridDataFrame
spatialAtRisk...
spatialAtRisk.function
spatialAtRisk...
fftinterpolate.fromXYZ
interpolate...
zvals.fromXYZ
zvals...
as.owinlist.stapp
as...
fftinterpolate.fromSPDF
fftinterpolate...
getRotation.stppp
getRotation...
identifygrid
identifygrid function...
mcmcProgressTk
graphical progress monitor...
plot.mcmcdiag
plot...
plot.lgcpQuantiles
plot...
hvals.lgcpPredict
hvals...
meanfield
meanfield function...
yvals.SpatialGridDataFrame
yvals...
inversebase
inversebase function...
lgcpForecast
lgcpForecast function...
plot.temporalAtRisk
plot...
as.owinlist
as...
multiply.list
multiply...
showGrid.lgcpPredict
showGrid...
spatialAtRisk.SpatialPolygonsDataFrame
spatialAtRisk...
summary.lgcpgrid
summary...
stapp
stapp function...
extract
extract function...
temporalAtRisk
temporalAtRisk function...
spatialAtRisk.fromXYZ
spatialAtRisk...
temporalAtRisk.numeric
temporalAtRisk...
getCounts
getCounts function...
loc2poly
loc2poly function...
print.mcmc
print...
rgauss
rgauss function...
seintens.lgcpPredict
seintens...
stppp.list
stppp...
txtProgressBar2
txtProgressBar2
GFinitialise
GFinitialise function...
as.SpatialPixelsDataFrame.lgcpgrid
as...
discreteWindow.lgcpPredict
discreteWindow...
gridfun
gridfun function...
selectObsWindow.stppp
selectObsWindow...
serr
serr function...
spatialIntensities
spatialIntensities function...
xvals.SpatialGridDataFrame
xvals...
nullFunction
nullFunction function...
yvals.lgcpPredict
yvals...
zvals.default
zvals...
wtowncoords
Welsh town details: location
meanfield.lgcpPredict
meanfield...
plotExceed.array
plotExceed...
print.temporalAtRisk
print...
print.fromSPDF
print...
rr.lgcpPredict
rr...
rescale.stppp
rescale...
GammafromY
GammafromY function...
discreteWindow
discreteWindow function...
gridav
gridav function...
sparsebase
sparsebase function...
image.lgcpgrid
image...
serr.lgcpPredict
serr...
thetaEst
thetaEst function...
integerise
integerise function...
is.retain
do we retain this iteration?
GAupdate
GAupdate function...
lgcpPredictSpatial
lgcpPredictSpatial function...
KinhomAverage
KinhomAverage function...
plot.fromSPDF
plot...
updateAMCMC.constanth
updateAMCMC...
as.array.lgcpgrid
as...
at
at function...
integerise.stppp
integerise...
intens
intens function...
is.pow2
is...
mcmctrace.lgcpPredict
mcmctrace...
setoutput
setoutput function...
stppp.ppp
stppp...
varfield.lgcpPredictINLA
varfield...
spatialparsEst
spatialparsEst function...
xvals.lgcpPredict
xvals...
Cvb
Cvb function...
Extract.stppp
Extract...
andrieuthomsh
andrieuthomsh function...
as.im.fromXYZ
as...
getRotation.default
getRotation...
exceedProbsAggregated
exceedProbsAggregated function...
gridInWindow
gridInWindow function...
zvals
zvals function...
getRotation
getRotation function...
print.fromXYZ
print...
target.and.grad.spatial
target...
GFfinalise
GFfinalise function...
SpatialPolygonsDataFrame.stapp
SpatialPolygonsDataFrame...
as.im.fromFunction
as...
dump2dir
dump2dir function...
GAreturnvalue.nullAverage
GAreturnvalue...
smultiply.list
smultiply...
GFinitialise.nullFunction
GFinitialise...
spatialAtRisk.default
spatialAtRisk...
summary.mcmc
summary...
MALAlgcpSpatial
MALAlgcpSpatial function...
as.SpatialPixelsDataFrame
as...
MALAlgcp
MALAlgcp function...
updateAMCMC
updateAMCMC function...
circulant
circulant function...
constantInTime.numeric
constantInTime...
iteration
iteration number...
d.func
d...
extract.lgcpPredict
extract...
is.burnin
is this a burn-in iteration?
nextStep
next step of an MCMC chain...
is.SPD
is...
print.lgcpgrid
print...
lgcpSimSpatial
lgcpSimSpatial function...
setTxtProgressBar2
set the progress bar...
varfield
varfield function...
meanfield.lgcpPredictINLA
meanfield...
plot.lgcpPredict
plot...
stapp.SpatialPolygonsDataFrame
stapp...
yvals.fromXYZ
yvals...
GAupdate.MonteCarloAverage
GAupdate...
GFupdate
GFupdate function...
GFreturnvalue.dump2dir
GFreturnvalue...
as.owinlist.SpatialPolygonsDataFrame
as...
exceedProbs
exceedProbs function...
hasNext.iter
hasNext...
lgcpPredictAggregated
lgcpPredictAggregated function...
lgcpgrid
lgcpgrid function...
plot.stppp
plot...
nullAverage
nullAverage function...
plotExceed
plotExceed function...
wpopdata
Population of Welsh counties
temporalAtRisk.function
temporalAtRisk...
paramprecbase
paramprecbase function...
wtowns
Welsh town details: population
constantInTime.stppp
constantInTime...
ginhomAverage
ginhomAverage function...
lgcpgrid.array
lgcpgrid...
GAfinalise
GAfinalise function...
GAreturnvalue
GAreturnvalue function...
gridfun.lgcpPredict
gridfun...
matchcovariance
matchcovariance function...
muEst
muEst function...
paramprec
paramprec function...
spatialAtRisk
spatialAtRisk function...
stppp
stppp function...
GFinitialise.dump2dir
GFinitialise...
MonteCarloAverage
MonteCarloAverage function...
affine.fromXYZ
affine...
affine.stppp
affine...
getCellCounts
getCellCounts function...
hvals
hvals function...
lambdaEst.ppp
lambdaEst...
lgcpPredictSpatialINLA
lgcpPredictSpatialINLA function...
neigh2D
neigh2D function...
mcmcpars
mcmcpars function...
print.fromFunction
print...
roteffgain
roteffgain function...
updateAMCMC.andrieuthomsh
updateAMCMC...
GAreturnvalue.MonteCarloAverage
GAreturnvalue...
GFreturnvalue
GFreturnvalue function...
affine.fromSPDF
affine...
blockcircbase
blockcircbase function...
density.stppp
density...
autocorr
autocorr function...
identify.lgcpPredict
identify...
initialiseAMCMC.constanth
initaliseAMCMC...
initialiseAMCMC
initialiseAMCMC function...
lgcpgrid.list
lgcpgrid...
loop.mcmc
loop over an iterator...
showGrid.stppp
showGrid...
mcmctrace
mcmctrace function...
GFupdate.dump2dir
GFupdate...
spatialIntensities.fromXYZ
spatialIntensities...
lgcpPredict
lgcpPredict function...
print.gridaverage
print...
rr
rr function...
seintens
seintens function...
GAinitialise.MonteCarloAverage
GAinitialise...
yvals
yvals function...
GFupdate.nullFunction
GFupdate...
add.list
add...
as.stppp
as...
circulant.matrix
circulant...
initialiseAMCMC.andrieuthomsh
initaliseAMCMC...
lgcpgrid.matrix
lgcpgrid...
plot.fromXYZ
plot...
plot.lgcpgrid
plot...
print.stapp
print...
selectObsWindow.default
selectObsWindow...
resetLoop
reset iterator...
showGrid
showGrid function...
spatialAtRisk.bivden
spatialAtRisk...
varfield.lgcpPredict
varfield...