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lgcp

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Version

Install

install.packages('lgcp')

Monthly Downloads

822

Version

1.3-14

License

GPL-2 | GPL-3

Maintainer

Benjamin Taylor

Last Published

January 11th, 2016

Functions in lgcp (1.3-14)

GAupdate function

GAreturnvalue function

GFinitialise.nullFunction

GFinitialise.nullFunction function

MALAlgcpSpatial

MALAlgcpSpatial function

Extract.mstppp function

EvaluatePrior function

GAfinalise function

CovFunction.function

CovFunction.function function

GFinitialise function

SpikedExponentialCovFct

SpikedExponentialCovFct function

lambdaEst function

GFreturnvalue.nullFunction

GFreturnvalue.nullFunction function

KinhomAverage function

affine.fromXYZ function

as.im.fromXYZ function

lgcppars function

GAfinalise.nullAverage

GAfinalise.nullAverage function

GPlist2array function

GaussianPrior function

SpatialPolygonsDataFrame.stapp

SpatialPolygonsDataFrame.stapp function

mstppp function

etavals function

GPrealisation function

MALAlgcpMultitypeSpatial.PlusPars

MALAlgcpMultitypeSpatial.PlusPars function

quantile.lgcpgrid

quantile.lgcpgrid function

constantInTime.stppp

constantInTime.stppp function

getlgcpPredictSpatialINLA

getlgcpPredictSpatialINLA function

discreteWindow function

GAinitialise function

gridInWindow function

C.diff.single.im

C.diff.single.im function

GFfinalise.nullFunction

GFfinalise.nullFunction function

MonteCarloAverage

MonteCarloAverage function

GAreturnvalue.MonteCarloAverage

GAreturnvalue.MonteCarloAverage function

nullAverage function

BetaParameters function

image.lgcpgrid function

paramprec function

GammafromY function

extract function

fftinterpolate.fromSPDF

fftinterpolate.fromSPDF function

as.owinlist.SpatialPolygonsDataFrame

as.owinlist.SpatialPolygonsDataFrame function

GAfinalise.MonteCarloAverage

GAfinalise.MonteCarloAverage function

raster.lgcpgrid

raster.lgcpgrid function

clearinterp function

getLHSformulaList

getLHSformulaList function

affine.fromSPDF

affine.fromSPDF function

lgcpSim function

GAupdate.MonteCarloAverage

GAupdate.MonteCarloAverage function

gridfun.lgcpPredict

gridfun.lgcpPredict function

rr.lgcpPredict function

ginhomAverage function

GFfinalise function

expectation.lgcpPredictSpatialOnlyPlusParameters

expectation.lgcpPredictSpatialOnlyPlusParameters function

as.owinlist.stapp

as.owinlist.stapp function

fftmultiply function

spatialAtRisk.SpatialPolygonsDataFrame

spatialAtRisk.SpatialPolygonsDataFrame function

interptypes function

autocorr function

samplePosterior

samplePosterior function

GFupdate function

betavals function

aggCovInfo function

PriorSpec.list function

GAinitialise.nullAverage

GAinitialise.nullAverage function

getZmats function

spatialAtRisk.function

spatialAtRisk.function function

mcmcProgressNone

null progress monitor

intens.lgcpPredict

intens.lgcpPredict function

affine.fromFunction

affine.fromFunction function

GAupdate.nullAverage

GAupdate.nullAverage function

add.list function

circulant.numeric

circulant.numeric function

bt.scalar function

expectation function

circulant function

GFinitialise.dump2dir

GFinitialise.dump2dir function

Extract.stppp function

guessinterp function

LogGaussianPrior

LogGaussianPrior function

aggregateformulaList

aggregateformulaList function

exceedProbs function

print.stppp function

transgreen function

seintens.lgcpPredict

seintens.lgcpPredict function

spatialIntensities.fromSPDF

spatialIntensities.fromSPDF function

GFreturnvalue.dump2dir

GFreturnvalue.dump2dir function

lgcpgrid.matrix

lgcpgrid.matrix function

lgcpForecast function

computeGradtruncSpatioTemporal

computeGradtruncSpatioTemporal function

as.im.fromFunction

as.im.fromFunction function

lgcpSimMultitypeSpatialCovariates

lgcpSimMultitypeSpatialCovariates function

affine.stppp function

integerise.mstppp

integerise.mstppp function

integerise function

gOverlay function

gridav.lgcpPredict

gridav.lgcpPredict function

checkObsWin function

as.SpatialPixelsDataFrame

as.SpatialPixelsDataFrame function

discreteWindow.lgcpPredict

discreteWindow.lgcpPredict function

iterator for MCMC loops

varfield.lgcpPredictINLA

varfield.lgcpPredictINLA function

GFreturnvalue function

postcov.lgcpPredictSpatialOnlyPlusParameters

postcov.lgcpPredictSpatialOnlyPlusParameters function

identify.lgcpPredict

identify.lgcpPredict function

selectObsWindow

selectObsWindow function

lgcpPrior function

lgcpSimSpatial function

as.fromXYZ function

constantInTime.numeric

constantInTime.numeric function

initialiseAMCMC.andrieuthomsh

initaliseAMCMC.andrieuthomsh function

inversebase function

meanfield.lgcpPredict

meanfield.lgcpPredict function

as.owin.stapp function

as.SpatialGridDataFrame.fromXYZ

as.SpatialGridDataFrame.fromXYZ function

eigenfrombase function

do we retain this iteration?

spatialAtRisk.bivden

spatialAtRisk.bivden function

spatialAtRisk.SpatialGridDataFrame

spatialAtRisk.SpatialGridDataFrame function

updateAMCMC function

assigninterp function

my.ginhomAverage

my.ginhomAverage function

getCovParameters.list

getCovParameters.list function

grid2spts function

is this a burn-in iteration?

fftinterpolate.fromFunction

fftinterpolate.fromFunction function

spatialIntensities.fromXYZ

spatialIntensities.fromXYZ function

plotExceed.lgcpPredict

plotExceed.lgcpPredict function

mcmcProgressTextBar

text bar progress monitor

getCovParameters

getCovParameters function

constanth function

exceedProbsAggregated

exceedProbsAggregated function

print.fromFunction

print.fromFunction function

computeGradtruncSpatial

computeGradtruncSpatial function

is.SPD function

yvals.default function

plotit function

meanfield function

lgcpPredictAggregateSpatialPlusPars

lgcpPredictAggregateSpatialPlusPars function

print.stapp function

thetaEst function

updateAMCMC.andrieuthomsh

updateAMCMC.andrieuthomsh function

condProbs function

formulaList function

varfield function

g.diff.single function

density.stppp function

dump2dir function

parsummary function

fftinterpolate.fromXYZ

interpolate.fromXYZ function

paramprecbase function

stGPrealisation

stGPrealisation function

lgcpSimSpatialCovariates

lgcpSimSpatialCovariates function

PriorSpec function

selectObsWindow.default

selectObsWindow.default function

next step of an MCMC chain

Population of Welsh counties

loop over an iterator

getZmat function

plotExceed.array

plotExceed.array function

print.mstppp function

plot.mcmcdiag function

getRotation function

iteration number

getpolyol function

spatialAtRisk function

sparsebase function

xvals.SpatialGridDataFrame

xvals.SpatialGridDataFrame function

showGrid function

intens function

plot.lgcpPredict

plot.lgcpPredict function

generic hasNext method

plot.lgcpQuantiles

plot.lgcpQuantiles function

parautocorr function

Welsh town details: population

toral.cov.mat function

RandomFieldsCovFct

RandomFieldsCovFct function

lgcpPredictSpatial

lgcpPredictSpatial function

segProbs function

showGrid.lgcpPredict

showGrid.lgcpPredict function

rescale.stppp function

updateAMCMC.constanth

updateAMCMC.constanth function

as.SpatialPixelsDataFrame.lgcpgrid

as.SpatialPixelsDataFrame.lgcpgrid function

graphical progress monitor

txtProgressBar2

A text progress bar with label

xvals.lgcpPredict

xvals.lgcpPredict function

transblack function

GFfinalise.dump2dir

GFfinalise.dump2dir function

GAinitialise.MonteCarloAverage

GAinitialise.MonteCarloAverage function

window.lgcpPredict

window.lgcpPredict function

my.KinhomAverage

my.KinhomAverage function

print.fromXYZ function

transblue function

priorpost function

lgcpPredictSpatioTemporalPlusPars

lgcpPredictSpatioTemporalPlusPars function

intens.lgcpSimSpatialPlusParameters

intens.lgcpSimSpatialPlusParameters function

spatialparsEst function

integerise.stppp

integerise.stppp function

plot.fromXYZ function

lgcpInits function

as.array.lgcpgrid

as.array.lgcpgrid function

rotmat function

loc2poly function

circulant.matrix

circulant.matrix function

temporalAtRisk.function

temporalAtRisk.function function

expectation.lgcpPredict

expectation.lgcpPredict function

selectObsWindow.stppp

selectObsWindow.stppp function

plot.lgcpgrid function

lgcpbayes function

print.lgcpgrid function

stppp.ppp function

showGrid.default

showGrid.default function

print.lgcpPredict

print.lgcpPredict function

fftinterpolate function

zvals.SpatialGridDataFrame

zvals.SpatialGridDataFrame function

getRotation.default

getRotation.default function

print.temporalAtRisk

print.temporalAtRisk function

print.mcmc function

GPdrv2_Multitype

GPdrv2_Multitype function

postcov.lgcpPredictMultitypeSpatialPlusParameters

postcov.lgcpPredictMultitypeSpatialPlusParameters function

quantile.lgcpPredict

quantile.lgcpPredict function

intens.lgcpSimMultitypeSpatialPlusParameters

intens.lgcpSimMultitypeSpatialPlusParameters function

mstppp.stppp function

aggCovInfo.ArealWeightedSum

aggCovInfo.ArealWeightedSum function

setTxtProgressBar2

set the progress bar

target.and.grad.SpatioTemporalPlusPars

target.and.grad.SpatioTemporalPlusPars function

as.ppp.mstppp function

lgcpgrid function

minimum.contrast.spatiotemporal

minimum.contrast.spatiotemporal function

spatialAtRisk.lgcpgrid

spatialAtRisk.lgcpgrid function

blockcircbase function

xvals.default function

target.and.grad.spatial

target.and.grad.spatial function

MALAlgcpSpatioTemporal.PlusPars

MALAlgcpSpatioTemporal.PlusPars function

meanfield.lgcpPredictINLA

meanfield.lgcpPredictINLA function

covEffects function

CovParameters function

plot.temporalAtRisk

plot.temporalAtRisk function

target.and.grad.spatialPlusPars

target.and.grad.spatialPlusPars function

spatialAtRisk.fromXYZ

spatialAtRisk.fromXYZ function

setoutput function

rgauss function

getCovParameters.GPrealisation

getCovParameters.GPrealisation function

MALAlgcpSpatial.PlusPars

MALAlgcpSpatial.PlusPars function

lgcpvignette function

osppp2merc function

YfromGamma function

stapp.SpatialPolygonsDataFrame

stapp.SpatialPolygonsDataFrame function

autocorrMultitype

autocorrMultitype function

cov.interp.fft function

andrieuthomsh function

minimum.contrast

minimum.contrast function

target.and.grad.AggregateSpatialPlusPars

target.and.grad.AggregateSpatialPlusPars function

neigh2D function

zvals.default function

d.func function

plotExceed function

as.fromXYZ.fromFunction

as.fromXYZ.fromFunction function

spatialAtRisk.default

spatialAtRisk.default function

textsummary function

as.ppp.stppp function

summary.mcmc function

exponentialCovFct

exponentialCovFct function

grid2spix function

genFFTgrid function

initialiseAMCMC.constanth

initaliseAMCMC.constanth function

getinterp function

lgcpPredict function

lambdaEst.ppp function

affine.SpatialPolygonsDataFrame

affine.SpatialPolygonsDataFrame function

seintens function

mcmcpars function

plot.fromSPDF function

target.and.grad.spatiotemporal

target.and.grad.spatiotemporal function

print.gridaverage

print.gridaverage function

aggCovInfo.ArealWeightedMean

aggCovInfo.ArealWeightedMean function

addTemporalCovariates

addTemporalCovariates function

showGrid.stppp function

summary.lgcpgrid

summary.lgcpgrid function

zvals.fromXYZ function

target.and.grad.MultitypespatialPlusPars

target.and.grad.MultitypespatialPlusPars function

MALAlgcpAggregateSpatial.PlusPars

MALAlgcpAggregateSpatial.PlusPars function

transred function

temporalAtRisk function

as.owinlist function

yvals.lgcpPredict

yvals.lgcpPredict function

as.im.fromSPDF function

initialiseAMCMC

initialiseAMCMC function

gridav function

lambdaEst.stppp

lambdaEst.stppp function

matchcovariance

matchcovariance function

GFupdate.dump2dir

GFupdate.dump2dir function

mcmcProgressPrint

printing progress monitor

aggCovInfo.Majority

aggCovInfo.Majority function

blockcircbaseFunction

blockcircbaseFunction function

extract.lgcpPredict

extract.lgcpPredict function

GAreturnvalue.nullAverage

GAreturnvalue.nullAverage function##'

GFupdate.nullFunction

GFupdate.nullFunction function

nullFunction function

plot.lgcpZmat function

getCellCounts function

roteffgain function

extendspatialAtRisk

extendspatialAtRisk function

serr.lgcpPredict

serr.lgcpPredict function

K.diff.single function

tempRaster function

MALAlgcp function

hasNext.iter function

identifygrid function

aggregateCovariateInfo

aggregateCovariateInfo function

as.list.lgcpgrid

as.list.lgcpgrid function

plot.lgcpAutocorr

plot.lgcpAutocorr function

grid2spoly function

fftgrid function

varfield.lgcpPredict

varfield.lgcpPredict function

plot.stppp function

postcov.lgcpPredictAggregateSpatialPlusParameters

postcov.lgcpPredictAggregateSpatialPlusParameters function

hvals.lgcpPredict

hvals.lgcpPredict function

rescale.mstppp function

smultiply.list function

print.dump2dir function

spatialIntensities

spatialIntensities function

temporalAtRisk.numeric

temporalAtRisk.numeric function

stppp.list function

yvals.fromXYZ function

GPdrv2 function

traceplots function

yvals.SpatialGridDataFrame

yvals.SpatialGridDataFrame function

xvals.fromXYZ function

as.stppp function

chooseCellwidth

chooseCellwidth function

constantInTime function

getCounts function

getRotation.stppp

getRotation.stppp function

mcmctrace.lgcpPredict

mcmctrace.lgcpPredict function

grid2spdf function

multiply.list function

neattable function

osppp2latlon function

postcov.lgcpPredictSpatioTemporalPlusParameters

postcov.lgcpPredictSpatioTemporalPlusParameters function

plot.mstppp function

numCases function

mstppp.ppp function

touchingowin function

CovFunction function

as.SpatialGridDataFrame

as.SpatialGridDataFrame function

as.stppp.stapp function

gridfun function

is.pow2 function

lgcpPredictAggregated

lgcpPredictAggregated function

lgcpPredictMultitypeSpatialPlusPars

lgcpPredictMultitypeSpatialPlusPars function

lgcpPredictSpatialINLA

lgcpPredictSpatialINLA function

lgcpPredictSpatialPlusPars

lgcpPredictSpatialPlusPars function

lgcpgrid.list function

lgcpgrid.array function

mcmctrace function

postcov function

mstppp.list function

print.fromSPDF function

spatialAtRisk.im

spatialAtRisk.im function

stapp.list function

Welsh town details: location