cnps

<p>Matrix of segments (rows) x 200 cells (columns) with entries denoting inferred copy numbers.</p>

datasets

Given an RNA-seq derived cell-by-gene matrix and an DNA-seq derived copy number segmentation, LIAYSON predicts the number of clones present in a tumor, their size, the copy number profile of each clone and the clone membership of each single cell (Andor, N. & Lau, B., et al. (2018) <doi:10.1101/445932>).

Noemi Andor

cnps: Segment-by-cell matrix of copy number states from NCI-N87 cell line.

Description

Usage

Arguments