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likeLTD (version 6.3.0)

Tools to Evaluate DNA Profile Evidence

Description

Tools to determine DNA profile Weight of Evidence. For further information see the 'likeLTD' guide provided, Balding, D.J. (2013) , or Steele, C.D. et al. (2016) .

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Version

Install

install.packages('likeLTD')

Monthly Downloads

141

Version

6.3.0

License

GPL-3

Maintainer

Christopher Steele

Last Published

February 9th, 2018

Functions in likeLTD (6.3.0)

allele.report.peaks

likeLTD::allele.report.peaks
create.likelihood.vectors.peaks

likeLTD::create.likelihood.vectors.peaks
create.likelihood.vectors

likeLTD::create.likelihood.vectors
determine.dropout

determine.dropout
DNA17-db

NGMSelect allele database
Identifiler-db

Identifiler allele database
evaluate

likeLTD::evaluate
locus.likes

likeLTD::locus.likes
defence.hypothesis.peaks

likeLTD::defence.hypothesis.peaks
locus.likes.peaks

likeLTD::locus.likes.peaks
likeLTD

likeLTD
lgc-allele-freqs-wbp

Allele database
Objective Functions

likeLTD objective functions
optimisation.params.peaks

likeLTD::optimisation.params.peaks
evaluate.peaks

likeLTD::evaluate.peaks
get.likely.genotypes

likeLTD::get.likely.genotypes
optimisation.params

likeLTD::optimisation.params
output.report

likeLTD::output.report
penalties

likeLTD::penalties
plotLikelihood.2d

likeLTD::plotLikelihood.2d
prosecution.hypothesis

likeLTD::prosecution.hypothesis
read.peaks.profile

likeLTD::read.peaks.profile
read.csp.profile

likeLTD::read.csp.profile
prosecution.hypothesis.peaks

likeLTD::prosecution.hypothesis.peaks
read.unc.profile

likeLTD::read.unc.profile
read.known.profiles

likeLTD::read.known.profiles
SGMplus-db

SGMplus allele database
CSP.heights.plot

likeLTD::CSP.heights.plot
allele.report

likeLTD::allele.report
evaluate.from.interim

likeLTD::evaluate.from.interim
evaluate.from.interim.peaks

likeLTD::evaluate.from.interim.peaks
DEoptimLoop

likeLTD::DEoptimLoop
initial.arguments

likeLTD::initial.arguments
get.likely.genotypes.peaks

likeLTD::get.likely.genotypes.peaks
pack.admin.input.peaks

likeLTD::pack.admin.input.peaks
relistArguments

likeLTD::relistArguments
peaks.results.plot

likeLTD::peaks.results.plot
create.likelihood

likeLTD::create.likelihood
relistArguments.peaks

likeLTD::relistArguments.peaks
create.likelihood.log

likeLTD::create.likelihood.log
linkage

Recombination rates for linked loci
load.allele.database

likeLTD::load.allele.database
output.report.peaks

likeLTD::output.report.peaks
pack.admin.input

likeLTD::pack.admin.input
unitTests.likeLTD

Unit tests for the package likeLTD
NISTglobalfiler-db

Globalfiler allele database from NIST
compatible.genotypes

likeLTD::compatible.genotypes
NISTidentifiler-db

Identifiler allele database from NIST
defence.hypothesis

likeLTD::defence.hypothesis