mle_plot_observed

Plots observed values vs. predicted values. The predicted values are obtained
from the model with the parameters values estimated by maximum likelihood
estimation using simulated annealing.

Managing and exploring parameter estimation results derived from Maximum Likelihood Estimation (MLE) using the 'likelihood' package. It provides functions for organizing, visualizing, and summarizing MLE outcomes, streamlining statistical analysis workflows. By improving interpretation and facilitating model evaluation, it helps users gain deeper insights into parameter estimation and model fitting, making MLE result exploration more efficient and accessible. See Goffe et al. (1994) <doi:10.1016/0304-4076(94)90038-8> for details on MLE, and Canham and Uriarte (2006) <doi:10.1890/04-0657> for application of MLE using 'likelihood'.

Antonio J. Pérez-Luque

likelihoodTools

Managing Results from Maximum Likelihood Estimation

Antonio Jesus Perez-Luque

mle_plot_observed function

<dl><dt>x</dt>
<dd>List with the results of the simulated annealing algorithm for Maximum
Likelihood Estimation. See <code>likelihood::anneal()</code></dd>
<dt>yvar</dt>
<dd>The name of the column that contains the dependent variable
(the “observed” value). This column must be present in the <code>source_data</code>
of the <code>x</code> (results) list</dd>
<dt>annotate</dt>
<dd>logical (default to TRUE), display the values of \(R^2\)
and slope of the regression of the observed on predicted values. See
<code>likelihood::Simulated Annealing Algorithm</code></dd>
<dt>lab_x</dt>
<dd>The text for the x-axis lab</dd>
<dt>lab_y</dt>
<dd>The text for the y-axis lab</dd>
<dt>...</dt>
<dd>other ggplot2 parameters</dd></dl>

Arguments

Plots Observed vs. Predicted MLE — mle_plot_observed

<dl>

<dt>x</dt>
<dd>List with the results of the simulated annealing algorithm for Maximum
Likelihood Estimation. See <code>likelihood::anneal()</code></dd>


<dt>yvar</dt>
<dd>The name of the column that contains the dependent variable
(the “observed” value). This column must be present in the <code>source_data</code>
of the <code>x</code> (results) list</dd>


<dt>annotate</dt>
<dd>logical (default to TRUE), display the values of \(R^2\)
and slope of the regression of the observed on predicted values. See
<code>likelihood::Simulated Annealing Algorithm</code></dd>


<dt>lab_x</dt>
<dd>The text for the x-axis lab</dd>


<dt>lab_y</dt>
<dd>The text for the y-axis lab</dd>


<dt>...</dt>
<dd>other ggplot2 parameters</dd>

</dl>

mle_plot_observed: Plots Observed vs. Predicted MLE

Description

Usage

Value

Arguments