`normalizeBetweenArrays`

instead.
`normalizeQuantiles(A, ties=TRUE)`

A

numeric matrix. Missing values are allowed.

ties

logical. If

`TRUE`

, ties in each column of `A`

are treated in careful way. tied values will be normalized to the mean of the corresponding pooled quantiles.-
A matrix of the same dimensions as

`A`

containing the normalized values.
If there are ties amongst the intensities for a particular array, then with `ties=FALSE`

the ties are broken in an unpredictable order.
If `ties=TRUE`

, all the tied values for that array will be normalized to the same value, the average of the quantiles for the tied values.