Usage
anova(object,design=NULL,ndups=2,...)Details
This function aids in quality assessment of microarray data and in the comparison of normalization methodologies.
It applies only to replicated two-color experiments in which all the arrays are hybridized with the same RNA targets, possibly with dye-swaps, so the design matrix should have only one column.
The function has not been heavily used and is somewhat experimental.Value
An object of class anova containing rows for between genes, between arrays, gene x array interaction, and between duplicate with array sums of squares.
Variance components are estimated for each source of variation.