getSplineBasis

Generate basis matrix for a periodic B-spline using <code>pbs::pbs()</code>.

A flexible approach, inspired by cosinor regression, for
differential analysis of rhythmic transcriptome data. See Singer and Hughey
(2018) <doi:10.1177/0748730418813785>.

Jake Hughey

limorhyde

Differential Analysis of Rhythmic Transcriptome Data

Jordan Singer

getSplineBasis function

<dl><dt>x</dt>
<dd>Values of the predictor variable.</dd>
<dt>period</dt>
<dd>Period for the predictor variable.</dd>
<dt>nKnots</dt>
<dd>Number of internal knots.</dd>
<dt>intercept</dt>
<dd>If <code>TRUE</code>, a column of ones will be included in the basis.</dd></dl>

Arguments

Basis matrix for periodic splines — getSplineBasis

<dl>

<dt>x</dt>
<dd>Values of the predictor variable.</dd>


<dt>period</dt>
<dd>Period for the predictor variable.</dd>


<dt>nKnots</dt>
<dd>Number of internal knots.</dd>


<dt>intercept</dt>
<dd>If <code>TRUE</code>, a column of ones will be included in the basis.</dd>

</dl>

getSplineBasis: Basis matrix for periodic splines

Description

Usage

Value

Arguments

Examples