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linelist (version 2.0.0)

Tagging and Validating Epidemiological Data

Description

Provides tools to help storing and handling case line list data. The 'linelist' class adds a tagging system to classical 'data.frame' objects to identify key epidemiological data such as dates of symptom onset, epidemiological case definition, age, gender or disease outcome. Once tagged, these variables can be seamlessly used in downstream analyses, making data pipelines more robust and reliable.

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Version

Install

install.packages('linelist')

Monthly Downloads

652

Version

2.0.0

License

MIT + file LICENSE

Issues

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Repository

https://github.com/epiverse-trace/linelist

Homepage

https://epiverse-trace.github.io/linelist/

Maintainer

Hugo Gruson

Last Published

April 23rd, 2025

Functions in linelist (2.0.0)

lost_tags_action

Check and set behaviour for lost tags

Changes tags of a linelist object

names<-.linelist

Rename columns of a linelist

Printing method for linelist objects

Get the list of tags in a linelist

Create a linelist from a data.frame

A selector function to use in tidyverse functions

Subsetting of linelist objects

Generate default tags for a linelist

linelist-package

Base Tools for Storing and Handling Case Line Lists

Extract a data.frame of all tagged variables

List acceptable variable types for tags

Check tagged variables are the right class

Checks the tags of a linelist object

validate_linelist

Checks the content of a linelist object

Get the list of tag names used in linelist