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lmf (version 1.2)
Functions for estimation and inference of selection in age-structured populations
Description
This R package provide methods for estimation and statistical inference on directional and fluctuating selection in age-structured populations.
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Version
Version
1.2.1
1.2
1.1
1.0
Install
install.packages('lmf')
Monthly Downloads
228
Version
1.2
License
GPL-2
Maintainer
Thomas Kvalnes
Last Published
October 31st, 2013
Functions in lmf (1.2)
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lm.extract
Extract linear regression components
eigenl
Calculating lambda, u and v
nfs
Estimate temporal coefficients of selection assuming no fluctuating selection
atCfn
Calculate corrected temporal mean coefficients of selection
nearPD
Find nearest positive definite matrix
rmnorm
Generate random numbers from the multivariate normal distribution
lnL.M
Maximum likelihood function for temporal coefficients of selection
summary.lmf
Summarizing lmf fits
inv
Calculate the inverse of a matrix
boot.lmf
Bootstrap resampling for class "lmf"
lmf-package
Functions for estimation and inference of selection in age-structured populations
sparrowdata
House Sparrow data set
lmf
Fitting age-structured selection model
fs
Estimate temporal coefficients of selection
se
Standard error
plot.lmf
Plot diagnostics for an lmf object
ci.boot.lmf
Confidence intervals for class "boot.lmf"
plot.boot.lmf
Plotting function for class "boot.lmf"
projection
The projection matrix
summary.boot.lmf
Summarizing bootstraps of lmf fits