dico

<p>Provides the score related to each base of the sequences.</p>

datasets

Functionalities for calculating the local score and calculating statistical relevance (p-value) to find a local Score in a sequence of given distribution (S. Mercier and J.-J. Daudin (2001) <https://hal.archives-ouvertes.fr/hal-00714174>) ; S. Karlin and S. Altschul (1990) <https://www.ncbi.nlm.nih.gov/pmc/articles/PMC53667/>  ; S. Mercier, D. Cellier and F. Charlot (2003) <https://hal.archives-ouvertes.fr/hal-00937529v1> ; A. Lagnoux, S. Mercier and P. Valois (2017) <doi:10.1093/bioinformatics/btw699> ).

David Robelin

localScore

Package for Sequence Analysis by Local Score

Sebastian Simon

Sabine Mercier

Sebastien Dejean

The authors of Eigen the library for the included version of Eigen 

dico function

<p>A score function for the 20 amino acid</p>

Format

Dictionnaire — dico

Dictionnaire

dico: Dictionnaire

Description

Usage

Arguments

Format

Examples