loose.rock (version 1.2.0)

coding.genes.ensembl: Ensembl coding genes, local function

Description

Ensembl coding genes, local function

Usage

coding.genes.ensembl(verbose = FALSE, useCache = TRUE)

Arguments

verbose

show messages with number of genes retrieved

useCache

Boolean indicating whether the results cache should be used. Setting to FALSE will disable reading and writing of the cache. This argument is likely to disappear after the cache functionality has been tested more thoroughly.

Value

a list with coding genes, mart and whether biomaRt had a problem, indicating that it shouldn't be used.

Examples

# NOT RUN {
  res <- loose.rock:::coding.genes.ensembl(TRUE, TRUE)
  nrow(res)
  head(res)
# }