background.plot

This function creates a ggplot object with customized axes range
(same for both), names and background

Computing functional traits-based distances between pairs of
species for species gathered in assemblages allowing to build several
functional spaces. The package allows to compute functional diversity
indices assessing the distribution of species (and of their dominance) in a
given functional space for each assemblage and the overlap between
assemblages in a given functional space, see: Chao et al. (2018)
<doi:10.1002/ecm.1343>, Maire et al. (2015) <doi:10.1111/geb.12299>,
Mouillot et al. (2013) <doi:10.1016/j.tree.2012.10.004>, Mouillot et al.
(2014) <doi:10.1073/pnas.1317625111>, Ricotta and Szeidl (2009)
<doi:10.1016/j.tpb.2009.10.001>. Graphical outputs are included.
Visit the 'mFD' website for more information, documentation and examples.

Camille Magneville

Compute and Illustrate the Multiple Facets of Functional
Diversity

Nicolas Loiseau

Camille Albouy

Nicolas Casajus

Thomas Claverie

Arthur Escalas

Fabien Leprieur

Eva Maire

David Mouillot

Sebastien Villeger

background.plot function

<dl><dt>range_faxes</dt>
<dd>a vector with minimum and maximum values of axes. Note
that to have a fair representation of position of species in all plots,
they should have the same range. Default: <code>range_faxes = c(NA, NA)</code> (the
range is computed according to the range of values among all axes).</dd>
<dt>faxes_nm</dt>
<dd>a vector with axes labels for figure.</dd>
<dt>color_bg</dt>
<dd>a R color name or an hexadecimal code used to fill plot
background. Default: <code>color_bg = "grey95"</code>.</dd></dl>

Arguments

Camille Magneville and Sebastien Villeger

Author

Plot background of multidimensional plots — background.plot

<dl>

<dt>range_faxes</dt>
<dd>a vector with minimum and maximum values of axes. Note
that to have a fair representation of position of species in all plots,
they should have the same range. Default: <code>range_faxes = c(NA, NA)</code> (the
range is computed according to the range of values among all axes).</dd>


<dt>faxes_nm</dt>
<dd>a vector with axes labels for figure.</dd>


<dt>color_bg</dt>
<dd>a R color name or an hexadecimal code used to fill plot
background. Default: <code>color_bg = "grey95"</code>.</dd>

</dl>

background.plot: Plot background of multidimensional plots

Description

Usage

Value

Arguments

Author

Examples