mHG.statistic.info-class

Summarizes data about the minimum-hypergeometric (mHG) statistic of a {0,1}^N vector.

classes

Runs a minimum-hypergeometric (mHG) test as described in: Eden, E. (2007). Discovering Motifs in Ranked Lists of DNA Sequences. Haifa.

Kobi Perl

Minimum-Hypergeometric Test

mHG.statistic.info-class function

Objects can be created by calls of the form <code>new("mHG.statistic.info", ...)</code>.

Objects from the Class

<dl class="dl-horizontal">
 <dt><code>mHG</code>:</dt><dd>The actual statistic.</dd>
 <dt><code>n</code>:</dt><dd>The index in which the minimum was obtained.</dd>
	<dt><code>b</code>:</dt><dd>\(\sum\limits_{i=1}^n \lambda_i\).</dd>
 </dl>

Slots

No methods defined with class "mHG.statistic.info" in the signature.

Methods

Class <code>"mHG.statistic.info"</code> — mHG.statistic.info-class

<dl class='dl-horizontal'>
 <dt><code>mHG</code>:</dt><dd>The actual statistic.</dd>
 <dt><code>n</code>:</dt><dd>The index in which the minimum was obtained.</dd>
	<dt><code>b</code>:</dt><dd>\(\sum\limits_{i=1}^n \lambda_i\).</dd>
 </dl>

mHG.statistic.info-class: Class `"mHG.statistic.info"`

Description

Arguments

Objects from the Class

Slots

Methods

References

See Also

Examples