parse_consensus_response

Parse consensus response from model

internal

Automated cell type annotation for single-cell RNA sequencing data
using consensus predictions from multiple large language models (LLMs). LLMs are
artificial intelligence models trained on vast text corpora to understand and
generate human-like text. This package integrates with 'Seurat' objects and
provides uncertainty quantification for annotations. Supports various LLM
providers including 'OpenAI', 'Anthropic', and 'Google'. The package leverages
these models through their respective APIs (Application Programming Interfaces)
<https://platform.openai.com/docs>, <https://docs.anthropic.com/>, and
<https://ai.google.dev/gemini-api/docs>.
For details see Yang et al. (2025) <doi:10.1101/2025.04.10.647852>.

Chen Yang

mLLMCelltype

Cell Type Annotation Using Large Language Models

parse_consensus_response function

<dl><dt>response</dt>
<dd>Character string response from model</dd></dl>

Arguments

Parse consensus response from model — parse_consensus_response

<dl>

<dt>response</dt>
<dd>Character string response from model</dd>

</dl>

parse_consensus_response: Parse consensus response from model

Description

Usage

Value

Arguments