Learn R Programming

maPredictDSC (version 1.10.0)

Phenotype prediction using microarray data: approach of the best overall team in the IMPROVER Diagnostic Signature Challenge

Description

This package implements the classification pipeline of the best overall team (Team221) in the IMPROVER Diagnostic Signature Challenge. Additional functionality is added to compare 27 combinations of data preprocessing, feature selection and classifier types.

Copy Link

Version

Version

1.10.0

License

GPL-2

Maintainer

Adi Laurentiu Tarca

Last Published

February 15th, 2017

Functions in maPredictDSC (1.10.0)

predictDSC

Phenotype prediction using microarray data: approach of the best overall team in the IMPROVER Diagnostic Signature Challenge
maPredictDSC-internal

Internal maPredictDSC functions
perfDSC

Area Under the Precision-Recall Curve (AUPR), Belief Confusion Metric (BCM) and Correct Class Enrichment Metric (CCEM).
aggregateDSC

Combine predictions from several fitted models fitted with predictDSC