meiotic_dist_threshold

Get the number of meioses between two individuals.
Note, that pedigrees must first have been inferred by <code>build_pedigrees()</code>.

MAle Lineage ANalysis by simulating
genealogies backwards and imposing short tandem repeats (STR) mutations forwards.
Intended for forensic Y chromosomal STR (Y-STR) haplotype analyses.
Numerous analyses are possible, e.g. number of matches and meiotic distance to matches.
Refer to papers mentioned in citation("malan") (DOI's:
<doi:10.1371/journal.pgen.1007028>,
<doi:10.21105/joss.00684> and
<doi:10.1016/j.fsigen.2018.10.004>).

Mikkel Andersen

malan

MAle Lineage ANalysis

Mikkel Meyer Andersen

meiotic_dist_threshold function

<dl><dt>ind1</dt>
<dd>Individual 1</dd>
<dt>ind2</dt>
<dd>Individual 2</dd>
<dt>threshold</dt>
<dd>Max search radius, if exceeding, return -1</dd></dl>

Arguments

Meiotic distance between two individuals (with threshold) — meiotic_dist_threshold

<dl>

<dt>ind1</dt>
<dd>Individual 1</dd>


<dt>ind2</dt>
<dd>Individual 2</dd>


<dt>threshold</dt>
<dd>Max search radius, if exceeding, return -1</dd>

</dl>

meiotic_dist_threshold: Meiotic distance between two individuals (with threshold)

Description

Usage

Value

Arguments