split_by_haplotypes

Individuals with the same haplotype will be in the same group
and individuals with different haplotypes will be in different groups.

MAle Lineage ANalysis by simulating
genealogies backwards and imposing short tandem repeats (STR) mutations forwards.
Intended for forensic Y chromosomal STR (Y-STR) haplotype analyses.
Numerous analyses are possible, e.g. number of matches and meiotic distance to matches.
Refer to papers mentioned in citation("malan") (DOI's:
<doi:10.1371/journal.pgen.1007028>,
<doi:10.21105/joss.00684> and
<doi:10.1016/j.fsigen.2018.10.004>).

Mikkel Andersen

malan

MAle Lineage ANalysis

Mikkel Meyer Andersen

split_by_haplotypes function

<dl><dt>population</dt>
<dd>Population obtained from simulation</dd>
<dt>pids</dt>
<dd>Vector of individual pids</dd></dl>

Arguments

Split pids by haplotype — split_by_haplotypes

<dl>

<dt>population</dt>
<dd>Population obtained from simulation</dd>


<dt>pids</dt>
<dd>Vector of individual pids</dd>

</dl>

split_by_haplotypes: Split pids by haplotype

Description

Usage

Value

Arguments