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maple (version 0.99.5)

Bayesian Analysis of Multi-Sample Spatial Transcriptomics Experiments

Description

Allows for robust probabilistic analysis of multi-sample spatial transcriptomics experiments (Allen et. al, 2021 ).

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Version

Install

install.packages('maple')

Monthly Downloads

7

Version

0.99.5

License

GPL (>= 2)

Maintainer

Carter Allen

Last Published

March 14th, 2022

Functions in maple (0.99.5)

plot_props_pie

Plot grouped pie charts of cell type proportions
plot_props_stacked

Plot stacked bar charts of cell types proportions
plot_props_grouped

Plot grouped bar charts of cell type proportions
fit_maple

Fit Maple multi-sample Bayesian spatial mixture model
get_maple_scores

Get posterior probability scores
plot_props_alluvial

Plot grouped alluvial plots of cell type proportions
offset_images

Offset multiple Seurat images
maple_viz

Plot tissue architecture labels