get_raw_clusters

This function tells the computer to look away for a second, so the goblins come and cluster your data while it's not watching.

Topological data analysis (TDA) is a method of data analysis that
uses techniques from topology to analyze high-dimensional data. Here we
implement Mapper, an algorithm from this area developed by Singh, Mémoli and
Carlsson (2007) which generalizes the concept of a
Reeb graph <https://en.wikipedia.org/wiki/Reeb_graph>.

George Clare Kennedy

mappeR

Construct and Visualize TDA Mapper Graphs

get_raw_clusters function

<dl><dt>dist_mats</dt>
<dd>A list of distance matrices of each bin that is to be clustered.</dd>
<dt>clusterer</dt>
<dd>A function which accepts a list of distance matrices as input, and returns the results of clustering done on each distance matrix in a list.</dd></dl>

Arguments

Ship data off to the clustering goblins — get_raw_clusters

<dl>

<dt>dist_mats</dt>
<dd>A list of distance matrices of each bin that is to be clustered.</dd>


<dt>clusterer</dt>
<dd>A function which accepts a list of distance matrices as input, and returns the results of clustering done on each distance matrix in a list.</dd>

</dl>

get_raw_clusters: Ship data off to the clustering goblins

Description

Usage

Value

Arguments