genotyping_global_error

<p>internal function to be documented</p>

void

<p>If <code>restricted = TRUE</code>, it restricts the prior to the 
possible classes under Mendelian, non double-reduced segregation 
given dosage of the parents</p>

internal

Construction of genetic maps in autopolyploid full-sib populations.
Uses pairwise recombination fraction estimation as the first
source of information to sequentially position allelic variants
in specific homologues. For situations where pairwise analysis has
limited power, the algorithm relies on the multilocus likelihood
obtained through a hidden Markov model (HMM). For more detail,
please see  Mollinari and Garcia (2019) <doi:10.1534/g3.119.400378>
and Mollinari et al. (2020) <doi:10.1534/g3.119.400620>.

Marcelo Mollinari

mappoly

Genetic Linkage Maps in Autopolyploids

Gabriel Gesteira

Guilhereme Pereira

Augusto Garcia

Zhao-Bang Zeng

Katharine Preedy

Robert Gentleman

Ross Ihaka

R Foundation 

R-core 

genotyping_global_error function

Prior probability for genotyping error — genotyping_global_error

Prior probability for genotyping error

genotyping_global_error: Prior probability for genotyping error

Description

Usage

Arguments