get_states_and_emission_one_parent

Get states and emission in one informative parent

internal

Construction of genetic maps in autopolyploid full-sib populations.
Uses pairwise recombination fraction estimation as the first
source of information to sequentially position allelic variants
in specific homologous chromosomes. For situations where pairwise
analysis has limited power, the algorithm relies on the multilocus
likelihood obtained through a hidden Markov model (HMM).
For more detail, please see Mollinari and Garcia (2019)
<doi:10.1534/g3.119.400378> and Mollinari et al. (2020)
<doi:10.1534/g3.119.400620>.

Marcelo Mollinari

mappoly

Genetic Linkage Maps in Autopolyploids

Gabriel Gesteira

Guilhereme Pereira

Augusto Garcia

Zhao-Bang Zeng

Katharine Preedy

Robert Gentleman

Ross Ihaka

R Foundation 

R-core 

get_states_and_emission_one_parent function

<dl><dt>void</dt>
<dd>internal function to be documented</dd></dl>

Arguments

Get states and emission in one informative parent — get_states_and_emission_one_parent

<dl>

<dt>void</dt>
<dd>internal function to be documented</dd>

</dl>

Get states and emission in one informative parent

get_states_and_emission_one_parent: Get states and emission in one informative parent

Description

Usage

Arguments