compare_maps

Compare lengths, density, maximum gaps and log likelihoods in a list of maps.
In order to make the maps comparable, the function uses the intersection of 
markers among maps.

Construction of genetic maps in autopolyploid full-sib populations.
Uses pairwise recombination fraction estimation as the first
source of information to sequentially position allelic variants
in specific homologous chromosomes. For situations where pairwise
analysis has limited power, the algorithm relies on the multilocus
likelihood obtained through a hidden Markov model (HMM).
For more detail, please see Mollinari and Garcia (2019)
<doi:10.1534/g3.119.400378> and Mollinari et al. (2020)
<doi:10.1534/g3.119.400620>.

Marcelo Mollinari

mappoly

Genetic Linkage Maps in Autopolyploids

Gabriel Gesteira

Cristiane Taniguti

Jeekin Lau

Oscar Riera-Lizarazu

Guilhereme Pereira

Augusto Garcia

Zhao-Bang Zeng

Katharine Preedy

Robert Gentleman

Ross Ihaka

R Foundation 

R-core 

compare_maps function

<dl><dt>...</dt>
<dd>a list of objects of class <code>mappoly.map</code></dd></dl>

Arguments

Compare a list of maps — compare_maps

<dl>

<dt>...</dt>
<dd>a list of objects of class <code>mappoly.map</code></dd>

</dl>

Compare a list of maps

compare_maps: Compare a list of maps

Description

Usage

Value

Arguments