mappoly (version 0.4.1)

update_map: Update map

Description

This function takes an object of class mappoly.map and checks for removed redundant markers in the original dataset. Once redundant markers are found, they are re-added to the map in their respective equivalent positions and another HMM round is performed.

Usage

update_map(input.maps, verbose = TRUE)

Value

an updated map (or list of maps) of class mappoly.map, containing the original map(s) plus redundant markers

Arguments

input.maps

a single map or a list of maps of class mappoly.map

verbose

if TRUE (default), shows information about each update process

Author

Gabriel Gesteira,

Examples

orig.map <- solcap.err.map
up.map <- lapply(solcap.err.map, update_map)
summary_maps(orig.map)
summary_maps(up.map)