htmlPage
.
The function mapGeneInfo
, takes all the arguments and generate
a character matrix of two columns. The first columns representing the
name of the argument and the second columns represents the value of an
argument.
The function widget.mapGeneInfo
allows the user to enter this
information interactively.
mapGeneInfo(widget = FALSE, Gnames, Name = "pubmed", ID = "genbank", ACC = "SMDacc", ...)
widget.mapGeneInfo(Gnames)
matrix
, data.frame
or marrayInfo
which contains description of spotted probe sequences.mapGeneInfo
generates a character matrix with the
first column representing the column headings of "Gnames" and the
second column representing the corresponding names in the list
URLstring
. For example, if a particular column in "Gnames"
with column names "ID" contains genebank accession number, then the
function mapGeneInfo
generates a row containing "ID" in the
first column and "genbank" in the second. Examples are SFGL
and UCBFGL
.
URLstring
is a list contains the URL to various external
database, E.g. operon, Riken, genbank.
The current choices are:
"pubmed", "locuslink", "riken", "SMDclid", "SMDacc", "operonh2", "operonh1" ,
"operonm2", "operonm1" and "genbank" .
"SMDclid" and "SMDacc" are links to Stanford Microarray Databases.
mapGeneInfo(ID="genebank", ll="locuslink")
mapGeneInfo(ID="locuslink", Sample.ID="riken")
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