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mclust (version 3.4.4)

Model-Based Clustering / Normal Mixture Modeling

Description

Model-based clustering and normal mixture modeling including Bayesian regularization

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Version

Install

install.packages('mclust')

Monthly Downloads

92,062

Version

3.4.4

License

file LICENSE

Maintainer

Chris Fraley

Last Published

April 8th, 2010

Functions in mclust (3.4.4)

mclustDAtrain

MclustDA Training
mvnX

Univariate or Multivariate Normal Fit
hcE

Model-based Hierarchical Clustering
priorControl

Conjugate Prior for Gaussian Mixtures.
summary.mclustDAtest

Classification and posterior probability from mclustDAtest.
classError

Classification error.
summary.mclustDAtrain

Models and classifications from mclustDAtrain
meE

EM algorithm starting with M-step for a parameterized Gaussian mixture model.
plot.mclustDAtrain

Plot mclustDA training models.
chevron

Simulated minefield data
adjustedRandIndex

Adjusted Rand Index
cdens

Component Density for Parameterized MVN Mixture Models
wreath

Data Simulated from a 14-Component Mixture
mclust-internal

Internal MCLUST functions
hypvol

Aproximate Hypervolume for Multivariate Data
mclustDAtest

MclustDA Testing
dens

Density for Parameterized MVN Mixtures
hc

Model-based Hierarchical Clustering
Mclust

Model-Based Clustering
mclust2Dplot

Plot two-dimensional data modelled by an MVN mixture.
Defaults.Mclust

List of values controlling defaults for some MCLUST functions.
mclustBIC

BIC for Model-Based Clustering
mvn

Univariate or Multivariate Normal Fit
mclustModelNames

MCLUST Model Names
mapClass

Correspondence between classifications.
mstepE

M-step for a parameterized Gaussian mixture model.
sim

Simulate from Parameterized MVN Mixture Models
emControl

Set control values for use with the EM algorithm.
estepE

E-step in the EM algorithm for a parameterized Gaussian mixture model.
coordProj

Coordinate projections of multidimensional data modeled by an MVN mixture.
hclass

Classifications from Hierarchical Agglomeration
plot.mclustDA

Plotting method for MclustDA discriminant analysis.
bic

BIC for Parameterized Gaussian Mixture Models
defaultPrior

Default conjugate prior for Gaussian mixtures.
em

EM algorithm starting with E-step for parameterized Gaussian mixture models.
map

Classification given Probabilities
plot.Mclust

Plot Model-Based Clustering Results
mclust1Dplot

Plot one-dimensional data modeled by an MVN mixture.
summary.mclustBIC

Summary Function for model-based clustering.
partconv

Numeric Encoding of a Partitioning
clPairs

Pairwise Scatter Plots showing Classification
summary.mclustModel

Summary Function for MCLUST Models
mclustDA

MclustDA discriminant analysis.
unmap

Indicator Variables given Classification
mclustModel

Best model based on BIC.
mclustVariance

Template for variance specification for parameterized Gaussian mixture models.
diabetes

Diabetes data
simE

Simulate from a Parameterized MVN Mixture Model
imputePairs

Pairwise Scatter Plots showing Missing Data Imputations
cv1EMtrain

Select discriminant models using cross validation
imputeData

Missing Data Imputation via the mix package
mclustOptions

Set default values for use with MCLUST.
partuniq

Classifies Data According to Unique Observations
cross

Simulated Cross Data
me

EM algorithm starting with M-step for parameterized MVN mixture models.
sigma2decomp

Convert mixture component covariances to decomposition form.
uncerPlot

Uncertainty Plot for Model-Based Clustering
cdensE

Component Density for a Parameterized MVN Mixture Model
estep

E-step for parameterized Gaussian mixture models.
randProj

Random projections of multidimensional data modeled by an MVN mixture.
decomp2sigma

Convert mixture component covariances to matrix form.
bicEMtrain

Select models in discriminant analysis using BIC
emE

EM algorithm starting with E-step for a parameterized Gaussian mixture model.
plot.mclustBIC

BIC Plot
surfacePlot

Density or uncertainty surface for two dimensional mixtures.
nVarParams

Number of Variance Parameters in Gaussian Mixture Models
mstep

M-step for parameterized Gaussian mixture models.