mcunit (version 0.3.2)

expect_mc_test: Test if p-values are coming from the null using a sequential approach.

Description

Requires as input a generic test that for a given sample size provides a vector of p-values. Aims to reject if these are not from the null. Guarantees a bound on the type I error rate.

Usage

expect_mc_test(object, control = NULL, npval = 1)

Arguments

object

A function taking one argument n - that generates p-values based on a sample size n.

control

a list controlling the algorithm

• n number of samples to be taken in the first step. Default: 1e3

• maxseqsteps: Number of sequential attempts to use. Default: 7.

• incn: Factor by which to multiply n from the second sequential attempt onward. Default: 4.

• level: bound on the type I error, ie the probability of wrongly rejecting a sampler with the correct distribution. Default: 1e-5.

• debug: If positive then debug information will be printed via 'message()'. Default: 0.

npval

number of p-values returned by the test. A Bonferroni correction is applied if >1. Default: 1.

Value

The first argument, invisibly, to allow chaining of expectations.

Examples

# NOT RUN {
pvalsampler <- function(n){
      x <- sample.int(11,size=n,replace=TRUE)-1;
     chisq.test(tabulate(x+1,nbins=11),
                p=rep(1/11,11))$p.value
}
expect_mc_test(pvalsampler)

# }