sig_sl

The function sig_sl computes the significative regions from a lindley process given a significance threshold.(function from localscore)

Provides functions to perform all steps of genome-wide
association meta-analysis for studying Genotype x Environment
interactions, from collecting the data to the manhattan plot.  The
procedure accounts for the potential correlation between studies. In
addition to the Fixed and Random models, one can investigate the
relationship between QTL effects and some qualitative or quantitative
covariate via the test of contrast and the meta-regression,
respectively.  The methodology is available from: (De Walsche, A., et
al. (2025) \doi{10.1371/journal.pgen.1011553}).

Annaïg De Walsche

metaGE

Meta-Analysis for Detecting Genotype x Environment Associations

Tristan Mary-Huard

sig_sl function

<dl><dt>lind</dt>
<dd>The lindley</dd>
<dt>pos</dt>
<dd>The position</dd>
<dt>th</dt>
<dd>The threshold</dd></dl>

Arguments

Computation of the significative regions — sig_sl

<dl>

<dt>lind</dt>
<dd>The lindley</dd>


<dt>pos</dt>
<dd>The position</dd>


<dt>th</dt>
<dd>The threshold</dd>

</dl>

sig_sl: Computation of the significative regions

Description

Usage

Value

Arguments