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metaMA (version 3.1.1)

Meta-analysis for MicroArrays

Description

Combines either p-values or modified effect sizes from different studies to find differentially expressed genes

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Version

Install

install.packages('metaMA')

Monthly Downloads

252

Version

3.1.1

License

GPL

Maintainer

Guillemette Marot

Last Published

January 26th, 2015

Functions in metaMA (3.1.1)

effectsize

Calculates effect sizes from given t or moderated t statistics
row.ttest.stat

Row t-tests
pvalcombination.paired

P-value combination for paired data
pvalcombination

P-value combination for unpaired data
rowVars

Row variance of an array
IDDIRR

Integration-driven Discovery and Integration-driven Revision Rates
metaMA-package

Meta-analysis for MicroArrays
directpvalcombi

Direct p-value combination
calcfit2Diffrep

Empirical Bayes statistics from limma analysis with unpaired data
directEScombi

Direct effect size combination
EScombination

Effect size combination for unpaired data
EScombination.paired

Effect size combination for paired data
Singhdata

Singh dataset
row.ttest.statp

Row paired t-tests