param: Mean simulation parameters

Description

Mean simulation parameters obtained from the analysis of a real dataset

Usage

data(param)

Arguments

source

Supplementary material of (Dillies et al., 2012) paper.

Details

Mean parameters provided in this package are empirical means (obtained after normalization for library size differences) of real data described in the following references.

References

M.A. Dillies, A. Rau, J. Aubert, C. Hennequet-Antier, M. Jeanmougin, N. Servant, C. Keime, G. Marot, D. Castel, J. Estelle, G. Guernec, B. Jagla, L. Jouneau, D. Laloe, C. Le Gall, B. Schaeffer, S. Le Crom, M. Guedj and F. Jaffrezic, on behalf of the French StatOmique Consortium (2012) A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis. Briefings in Bioinformatics (in press) doi:10.1093/bib/bbs046. T. Strub, S. Giuliano, T. Ye, et al. (2011) Essential role of microphthalmia transcription factor for DNA replication, mitosis and genomic stability in melanoma. emph{Oncogene} 30:2319-32.

Examples

Run this code

data(param)

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