install_mdrb

Installs metabodecon's Rust backend <a href="https://github.com/spang-lab/mdrb">mdrb</a>
from <a href="https://spang-lab.r-universe.dev/mdrb">R-Universe</a>.
lifecycle::badge("experimental")

A framework for deconvolution, alignment and postprocessing
of 1-dimensional (1d) nuclear magnetic resonance (NMR) spectra, resulting in
a data matrix of aligned signal integrals. The deconvolution part uses the
algorithm described in Koh et al. (2009) <doi:10.1016/j.jmr.2009.09.003>.
The alignment part is based on functions from the 'speaq' package, described
in Beirnaert et al. (2018) <doi:10.1371/journal.pcbi.1006018> and Vu et al.
(2011) <doi:10.1186/1471-2105-12-405>. A detailed description and evaluation
of an early version of the package, 'MetaboDecon1D v0.2.2', can be found in
Haeckl et al. (2021) <doi:10.3390/metabo11070452>.

Tobias Schmidt

metabodecon

Deconvolution and Alignment of 1d NMR Spectra

Martina Haeckl

Yanren Linda Hu

Wolfram Gronwald

install_mdrb function

<dl><dt>ask</dt>
<dd>Whether to ask for confirmation before attempting installation. Default is
TRUE.</dd>
<dt>...</dt>
<dd>Additional arguments to pass to <code><a href="/link/utils%3A%3Ainstall.packages()?package=metabodecon&version=1.6.2" data-mini-rdoc="metabodecon::utils::install.packages()">utils::install.packages()</a></code> when attempting
installation of mdrb.</dd></dl>

Arguments

2024-2025 Tobias Schmidt: initial version.

Author

Installs metabodecon's Rust backend <a href='https://github.com/spang-lab/mdrb'>mdrb</a>
from <a href='https://spang-lab.r-universe.dev/mdrb'>R-Universe</a>.
lifecycle::badge("experimental")

Install Rust Backend — install_mdrb

<dl>

<dt>ask</dt>
<dd>Whether to ask for confirmation before attempting installation. Default is
TRUE.</dd>


<dt>...</dt>
<dd>Additional arguments to pass to <code><a href='https://rdrr.io/r/utils/install.packages.html'>utils::install.packages()</a></code> when attempting
installation of mdrb.</dd>

</dl>

install_mdrb: Install Rust Backend

Description

Usage

Value

Arguments

Author

Examples