tmpdir

Returns the path to metabodecon's temporary session directory. This directory
equals subdirectory 'metabodecon' of R's temporary session directory
<code><a href="/link/base%3A%3Atempdir()?package=metabodecon&version=1.6.2" data-mini-rdoc="metabodecon::base::tempdir()">base::tempdir()</a></code> plus additional path normalization.

A framework for deconvolution, alignment and postprocessing
of 1-dimensional (1d) nuclear magnetic resonance (NMR) spectra, resulting in
a data matrix of aligned signal integrals. The deconvolution part uses the
algorithm described in Koh et al. (2009) <doi:10.1016/j.jmr.2009.09.003>.
The alignment part is based on functions from the 'speaq' package, described
in Beirnaert et al. (2018) <doi:10.1371/journal.pcbi.1006018> and Vu et al.
(2011) <doi:10.1186/1471-2105-12-405>. A detailed description and evaluation
of an early version of the package, 'MetaboDecon1D v0.2.2', can be found in
Haeckl et al. (2021) <doi:10.3390/metabo11070452>.

Tobias Schmidt

metabodecon

Deconvolution and Alignment of 1d NMR Spectra

Martina Haeckl

Yanren Linda Hu

Wolfram Gronwald

tmpdir function

<dl><dt>subdir</dt>
<dd>Optional subdirectory within the temporary session directory.</dd>
<dt>create</dt>
<dd>Whether to create the directory if it does not yet exist.</dd></dl>

Arguments

2024-2025 Tobias Schmidt: initial version.

Author

Returns the path to metabodecon's temporary session directory. This directory
equals subdirectory 'metabodecon' of R's temporary session directory
<code><a href='https://rdrr.io/r/base/tempfile.html'>base::tempdir()</a></code> plus additional path normalization.

Temporary Session Directory — tmpdir

<dl>

<dt>subdir</dt>
<dd>Optional subdirectory within the temporary session directory.</dd>


<dt>create</dt>
<dd>Whether to create the directory if it does not yet exist.</dd>

</dl>

tmpdir: Temporary Session Directory

Description

Usage

Value

Arguments

Author

See Also

Examples