metacoder (version 0.1.2)

silva_ex_data: Example dataset from SILVA

Description

https://www.arb-silva.de/

Usage

silva_ex_data

Format

An object of type taxmap

Examples

## Not run: 
# 
# file_path <- system.file("extdata", "silva_nr99.fasta", package = "metacoder")
# sequences <- ape::read.FASTA(file_path)
# silva_ex_data <- extract_taxonomy(sequences,
#                                   regex = "^(.*?) (.*)$",
#                                   key = c(id = "obs_info", "class"),
#                                   class_sep = ";")
# ## End(Not run)